C1 CAGE detects transcription start sites and enhancer activity at single-cell resolution
C1 CAGE detects transcription start sites and enhancer activity at single-cell resolution
About this item
Full title
Author / Creator
Kouno, Tsukasa , Moody, Jonathan , Kwon, Andrew Tae-Jun , Shibayama, Youtaro , Kato, Sachi , Huang, Yi , Böttcher, Michael , Motakis, Efthymios , Mendez, Mickaël , Severin, Jessica , Luginbühl, Joachim , Abugessaisa, Imad , Hasegawa, Akira , Takizawa, Satoshi , Arakawa, Takahiro , Furuno, Masaaki , Ramalingam, Naveen , West, Jay , Suzuki, Harukazu , Kasukawa, Takeya , Lassmann, Timo , Hon, Chung-Chau , Arner, Erik , Carninci, Piero , Plessy, Charles and Shin, Jay W.
Publisher
London: Nature Publishing Group UK
Journal title
Language
English
Formats
Publication information
Publisher
London: Nature Publishing Group UK
Subjects
More information
Scope and Contents
Contents
Single-cell transcriptomic profiling is a powerful tool to explore cellular heterogeneity. However, most of these methods focus on the 3′-end of polyadenylated transcripts and provide only a partial view of the transcriptome. We introduce C1 CAGE, a method for the detection of transcript 5′-ends with an original sample multiplexing strategy in the...
Alternative Titles
Full title
C1 CAGE detects transcription start sites and enhancer activity at single-cell resolution
Authors, Artists and Contributors
Author / Creator
Moody, Jonathan
Kwon, Andrew Tae-Jun
Shibayama, Youtaro
Kato, Sachi
Huang, Yi
Böttcher, Michael
Motakis, Efthymios
Mendez, Mickaël
Severin, Jessica
Luginbühl, Joachim
Abugessaisa, Imad
Hasegawa, Akira
Takizawa, Satoshi
Arakawa, Takahiro
Furuno, Masaaki
Ramalingam, Naveen
West, Jay
Suzuki, Harukazu
Kasukawa, Takeya
Lassmann, Timo
Hon, Chung-Chau
Arner, Erik
Carninci, Piero
Plessy, Charles
Shin, Jay W.
Identifiers
Primary Identifiers
Record Identifier
TN_cdi_doaj_primary_oai_doaj_org_article_2b223db146cd404e9768769b7c47b35c
Permalink
https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_doaj_primary_oai_doaj_org_article_2b223db146cd404e9768769b7c47b35c
Other Identifiers
ISSN
2041-1723
E-ISSN
2041-1723
DOI
10.1038/s41467-018-08126-5
