HiGlass: web-based visual exploration and analysis of genome interaction maps
HiGlass: web-based visual exploration and analysis of genome interaction maps
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Author / Creator
Kerpedjiev, Peter , Abdennur, Nezar , Lekschas, Fritz , McCallum, Chuck , Dinkla, Kasper , Strobelt, Hendrik , Luber, Jacob M. , Ouellette, Scott B. , Azhir, Alaleh , Kumar, Nikhil , Hwang, Jeewon , Lee, Soohyun , Alver, Burak H. , Pfister, Hanspeter , Mirny, Leonid A. , Park, Peter J. and Gehlenborg, Nils
Publisher
England: BioMed Central Ltd
Journal title
Language
English
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Publication information
Publisher
England: BioMed Central Ltd
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Scope and Contents
Contents
We present HiGlass, an open source visualization tool built on web technologies that provides a rich interface for rapid, multiplex, and multiscale navigation of 2D genomic maps alongside 1D genomic tracks, allowing users to combine various data types, synchronize multiple visualization modalities, and share fully customizable views with others. We demonstrate its utility in exploring different experimental conditions, comparing the results of analyses, and creating interactive snapshots to share with collaborators and the broader public. HiGlass is accessible online at http://higlass.io and is also available as a containerized application that can be run on any platform....
Alternative Titles
Full title
HiGlass: web-based visual exploration and analysis of genome interaction maps
Authors, Artists and Contributors
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Primary Identifiers
Record Identifier
TN_cdi_doaj_primary_oai_doaj_org_article_2c92e43c941a4abc808b8f0ebf34e423
Permalink
https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_doaj_primary_oai_doaj_org_article_2c92e43c941a4abc808b8f0ebf34e423
Other Identifiers
ISSN
1474-760X,1474-7596
E-ISSN
1474-760X
DOI
10.1186/s13059-018-1486-1
