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Bento: a toolkit for subcellular analysis of spatial transcriptomics data

Bento: a toolkit for subcellular analysis of spatial transcriptomics data

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_doaj_primary_oai_doaj_org_article_370b90adee9c46aa93c11ebcecb1cb61

Bento: a toolkit for subcellular analysis of spatial transcriptomics data

About this item

Full title

Bento: a toolkit for subcellular analysis of spatial transcriptomics data

Publisher

England: BioMed Central Ltd

Journal title

Genome Biology, 2024-04, Vol.25 (1), p.82-82, Article 82

Language

English

Formats

Publication information

Publisher

England: BioMed Central Ltd

More information

Scope and Contents

Contents

The spatial organization of molecules in a cell is essential for their functions. While current methods focus on discerning tissue architecture, cell–cell interactions, and spatial expression patterns, they are limited to the multicellular scale. We present Bento, a Python toolkit that takes advantage of single-molecule information to enable spatia...

Alternative Titles

Full title

Bento: a toolkit for subcellular analysis of spatial transcriptomics data

Identifiers

Primary Identifiers

Record Identifier

TN_cdi_doaj_primary_oai_doaj_org_article_370b90adee9c46aa93c11ebcecb1cb61

Permalink

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_doaj_primary_oai_doaj_org_article_370b90adee9c46aa93c11ebcecb1cb61

Other Identifiers

ISSN

1474-760X,1474-7596

E-ISSN

1474-760X

DOI

10.1186/s13059-024-03217-7

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