A diploid assembly-based benchmark for variants in the major histocompatibility complex
A diploid assembly-based benchmark for variants in the major histocompatibility complex
About this item
Full title
Author / Creator
Chin, Chen-Shan , Wagner, Justin , Zeng, Qiandong , Garrison, Erik , Garg, Shilpa , Fungtammasan, Arkarachai , Rautiainen, Mikko , Aganezov, Sergey , Kirsche, Melanie , Zarate, Samantha , Schatz, Michael C. , Xiao, Chunlin , Rowell, William J. , Markello, Charles , Farek, Jesse , Sedlazeck, Fritz J. , Bansal, Vikas , Yoo, Byunggil , Miller, Neil , Zhou, Xin , Carroll, Andrew , Barrio, Alvaro Martinez , Salit, Marc , Marschall, Tobias , Dilthey, Alexander T. and Zook, Justin M.
Publisher
London: Nature Publishing Group UK
Journal title
Language
English
Formats
Publication information
Publisher
London: Nature Publishing Group UK
Subjects
More information
Scope and Contents
Contents
Most human genomes are characterized by aligning individual reads to the reference genome, but accurate long reads and linked reads now enable us to construct accurate, phased de novo assemblies. We focus on a medically important, highly variable, 5 million base-pair (bp) region where diploid assembly is particularly useful - the Major Histocompati...
Alternative Titles
Full title
A diploid assembly-based benchmark for variants in the major histocompatibility complex
Authors, Artists and Contributors
Author / Creator
Wagner, Justin
Zeng, Qiandong
Garrison, Erik
Garg, Shilpa
Fungtammasan, Arkarachai
Rautiainen, Mikko
Aganezov, Sergey
Kirsche, Melanie
Zarate, Samantha
Schatz, Michael C.
Xiao, Chunlin
Rowell, William J.
Markello, Charles
Farek, Jesse
Sedlazeck, Fritz J.
Bansal, Vikas
Yoo, Byunggil
Miller, Neil
Zhou, Xin
Carroll, Andrew
Barrio, Alvaro Martinez
Salit, Marc
Marschall, Tobias
Dilthey, Alexander T.
Zook, Justin M.
Identifiers
Primary Identifiers
Record Identifier
TN_cdi_doaj_primary_oai_doaj_org_article_5e9e6d5734354b4a86ef752be8c0d26e
Permalink
https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_doaj_primary_oai_doaj_org_article_5e9e6d5734354b4a86ef752be8c0d26e
Other Identifiers
ISSN
2041-1723
E-ISSN
2041-1723
DOI
10.1038/s41467-020-18564-9
