A step-by-step guide to analyzing CAGE data using R/Bioconductor [version 1; peer review: 3 approved...
A step-by-step guide to analyzing CAGE data using R/Bioconductor [version 1; peer review: 3 approved]
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Publisher
England: Faculty of 1000 Ltd
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Language
English
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Publisher
England: Faculty of 1000 Ltd
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Contents
Cap Analysis of Gene Expression (CAGE) is one of the most popular 5'-end sequencing methods. In a single experiment, CAGE can be used to locate and quantify the expression of both Transcription Start Sites (TSSs) and enhancers. This is workflow is a case study on how to use the CAGEfightR package to orchestrate analysis of CAGE data within the Bioc...
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Full title
A step-by-step guide to analyzing CAGE data using R/Bioconductor [version 1; peer review: 3 approved]
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TN_cdi_doaj_primary_oai_doaj_org_article_6008968002d14e2bb3c43426b622851c
Permalink
https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_doaj_primary_oai_doaj_org_article_6008968002d14e2bb3c43426b622851c
Other Identifiers
ISSN
2046-1402
E-ISSN
2046-1402
DOI
10.12688/f1000research.18456.1
