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Promoter-enhancer interactions identified from Hi-C data using probabilistic models and hierarchical...

Promoter-enhancer interactions identified from Hi-C data using probabilistic models and hierarchical...

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_doaj_primary_oai_doaj_org_article_68db1c1c65d14e61bd6b9fb135f785e7

Promoter-enhancer interactions identified from Hi-C data using probabilistic models and hierarchical topological domains

About this item

Full title

Promoter-enhancer interactions identified from Hi-C data using probabilistic models and hierarchical topological domains

Publisher

London: Nature Publishing Group UK

Journal title

Nature communications, 2017-12, Vol.8 (1), p.2237-12, Article 2237

Language

English

Formats

Publication information

Publisher

London: Nature Publishing Group UK

More information

Scope and Contents

Contents

Proximity-ligation methods such as Hi-C allow us to map physical DNA–DNA interactions along the genome, and reveal its organization into topologically associating domains (TADs). As the Hi-C data accumulate, computational methods were developed for identifying domain borders in multiple cell types and organisms. Here, we present PSYCHIC, a computat...

Alternative Titles

Full title

Promoter-enhancer interactions identified from Hi-C data using probabilistic models and hierarchical topological domains

Authors, Artists and Contributors

Identifiers

Primary Identifiers

Record Identifier

TN_cdi_doaj_primary_oai_doaj_org_article_68db1c1c65d14e61bd6b9fb135f785e7

Permalink

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_doaj_primary_oai_doaj_org_article_68db1c1c65d14e61bd6b9fb135f785e7

Other Identifiers

ISSN

2041-1723

E-ISSN

2041-1723

DOI

10.1038/s41467-017-02386-3

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