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A Markov random field model for network-based differential expression analysis of single-cell RNA-se...

A Markov random field model for network-based differential expression analysis of single-cell RNA-se...

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_doaj_primary_oai_doaj_org_article_73f8d1f15edc4208ad885fb4bf2897d7

A Markov random field model for network-based differential expression analysis of single-cell RNA-seq data

About this item

Full title

A Markov random field model for network-based differential expression analysis of single-cell RNA-seq data

Publisher

England: BioMed Central Ltd

Journal title

BMC bioinformatics, 2021-10, Vol.22 (1), p.524-524, Article 524

Language

English

Formats

Publication information

Publisher

England: BioMed Central Ltd

More information

Scope and Contents

Contents

Recent development of single cell sequencing technologies has made it possible to identify genes with different expression (DE) levels at the cell type level between different groups of samples. In this article, we propose to borrow information through known biological networks to increase statistical power to identify differentially expressed gene...

Alternative Titles

Full title

A Markov random field model for network-based differential expression analysis of single-cell RNA-seq data

Identifiers

Primary Identifiers

Record Identifier

TN_cdi_doaj_primary_oai_doaj_org_article_73f8d1f15edc4208ad885fb4bf2897d7

Permalink

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_doaj_primary_oai_doaj_org_article_73f8d1f15edc4208ad885fb4bf2897d7

Other Identifiers

ISSN

1471-2105

E-ISSN

1471-2105

DOI

10.1186/s12859-021-04412-0

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