Haplotype-resolved genomes provide insights into structural variation and gene content in Angus and...
Haplotype-resolved genomes provide insights into structural variation and gene content in Angus and Brahman cattle
About this item
Full title
Author / Creator
Low, Wai Yee , Tearle, Rick , Liu, Ruijie , Koren, Sergey , Rhie, Arang , Bickhart, Derek M. , Rosen, Benjamin D. , Kronenberg, Zev N. , Kingan, Sarah B. , Tseng, Elizabeth , Thibaud-Nissen, Françoise , Martin, Fergal J. , Billis, Konstantinos , Ghurye, Jay , Hastie, Alex R. , Lee, Joyce , Pang, Andy W. C. , Heaton, Michael P. , Phillippy, Adam M. , Hiendleder, Stefan , Smith, Timothy P. L. and Williams, John L.
Publisher
London: Nature Publishing Group UK
Journal title
Language
English
Formats
Publication information
Publisher
London: Nature Publishing Group UK
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More information
Scope and Contents
Contents
Inbred animals were historically chosen for genome analysis to circumvent assembly issues caused by haplotype variation but this resulted in a composite of the two genomes. Here we report a haplotype-aware scaffolding and polishing pipeline which was used to create haplotype-resolved, chromosome-level genome assemblies of Angus (taurine) and Brahma...
Alternative Titles
Full title
Haplotype-resolved genomes provide insights into structural variation and gene content in Angus and Brahman cattle
Authors, Artists and Contributors
Author / Creator
Tearle, Rick
Liu, Ruijie
Koren, Sergey
Rhie, Arang
Bickhart, Derek M.
Rosen, Benjamin D.
Kronenberg, Zev N.
Kingan, Sarah B.
Tseng, Elizabeth
Thibaud-Nissen, Françoise
Martin, Fergal J.
Billis, Konstantinos
Ghurye, Jay
Hastie, Alex R.
Lee, Joyce
Pang, Andy W. C.
Heaton, Michael P.
Phillippy, Adam M.
Hiendleder, Stefan
Smith, Timothy P. L.
Williams, John L.
Identifiers
Primary Identifiers
Record Identifier
TN_cdi_doaj_primary_oai_doaj_org_article_749bdf7435784bab8b04ef53bcc16d5a
Permalink
https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_doaj_primary_oai_doaj_org_article_749bdf7435784bab8b04ef53bcc16d5a
Other Identifiers
ISSN
2041-1723
E-ISSN
2041-1723
DOI
10.1038/s41467-020-15848-y
