Microseek: A Protein-Based Metagenomic Pipeline for Virus Diagnostic and Discovery
Microseek: A Protein-Based Metagenomic Pipeline for Virus Diagnostic and Discovery
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Publisher
Basel: MDPI AG
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Language
English
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Publisher
Basel: MDPI AG
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Contents
We present Microseek, a pipeline for virus identification and discovery based on RVDB-prot, a comprehensive, curated and regularly updated database of viral proteins. Microseek analyzes metagenomic Next Generation Sequencing (mNGS) raw data by performing quality steps, de novo assembly, and by scoring the Lowest Common Ancestor (LCA) from translate...
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Full title
Microseek: A Protein-Based Metagenomic Pipeline for Virus Diagnostic and Discovery
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TN_cdi_doaj_primary_oai_doaj_org_article_9f5cfdd07c844a00a764cd73b5557cb7
Permalink
https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_doaj_primary_oai_doaj_org_article_9f5cfdd07c844a00a764cd73b5557cb7
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ISSN
1999-4915
E-ISSN
1999-4915
DOI
10.3390/v14091990
