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Dimensionality reduction by UMAP to visualize physical and genetic interactions

Dimensionality reduction by UMAP to visualize physical and genetic interactions

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_doaj_primary_oai_doaj_org_article_a0311ead30404d9aa682e166ed1e7d83

Dimensionality reduction by UMAP to visualize physical and genetic interactions

About this item

Full title

Dimensionality reduction by UMAP to visualize physical and genetic interactions

Publisher

London: Nature Publishing Group UK

Journal title

Nature communications, 2020-03, Vol.11 (1), p.1537-1537, Article 1537

Language

English

Formats

Publication information

Publisher

London: Nature Publishing Group UK

More information

Scope and Contents

Contents

Dimensionality reduction is often used to visualize complex expression profiling data. Here, we use the Uniform Manifold Approximation and Projection (UMAP) method on published transcript profiles of 1484 single gene deletions of
Saccharomyces cerevisiae
. Proximity in low-dimensional UMAP space identifies groups of genes that correspond to p...

Alternative Titles

Full title

Dimensionality reduction by UMAP to visualize physical and genetic interactions

Identifiers

Primary Identifiers

Record Identifier

TN_cdi_doaj_primary_oai_doaj_org_article_a0311ead30404d9aa682e166ed1e7d83

Permalink

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_doaj_primary_oai_doaj_org_article_a0311ead30404d9aa682e166ed1e7d83

Other Identifiers

ISSN

2041-1723

E-ISSN

2041-1723

DOI

10.1038/s41467-020-15351-4

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