ProbPFP: a multiple sequence alignment algorithm combining hidden Markov model optimized by particle...
ProbPFP: a multiple sequence alignment algorithm combining hidden Markov model optimized by particle swarm optimization with partition function
About this item
Full title
Author / Creator
Zhan, Qing , Wang, Nan , Jin, Shuilin , Tan, Renjie , Jiang, Qinghua and Wang, Yadong
Publisher
England: BioMed Central Ltd
Journal title
Language
English
Formats
Publication information
Publisher
England: BioMed Central Ltd
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More information
Scope and Contents
Contents
During procedures for conducting multiple sequence alignment, that is so essential to use the substitution score of pairwise alignment. To compute adaptive scores for alignment, researchers usually use Hidden Markov Model or probabilistic consistency methods such as partition function. Recent studies show that optimizing the parameters for hidden M...
Alternative Titles
Full title
ProbPFP: a multiple sequence alignment algorithm combining hidden Markov model optimized by particle swarm optimization with partition function
Authors, Artists and Contributors
Author / Creator
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Primary Identifiers
Record Identifier
TN_cdi_doaj_primary_oai_doaj_org_article_a1608e1ac8a748038072ae9c0ee67823
Permalink
https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_doaj_primary_oai_doaj_org_article_a1608e1ac8a748038072ae9c0ee67823
Other Identifiers
ISSN
1471-2105
E-ISSN
1471-2105
DOI
10.1186/s12859-019-3132-7
