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MetageNN: a memory-efficient neural network taxonomic classifier robust to sequencing errors and mis...

MetageNN: a memory-efficient neural network taxonomic classifier robust to sequencing errors and mis...

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_doaj_primary_oai_doaj_org_article_a2533d14f4ce45eeaf6a99a818047d8b

MetageNN: a memory-efficient neural network taxonomic classifier robust to sequencing errors and missing genomes

About this item

Full title

MetageNN: a memory-efficient neural network taxonomic classifier robust to sequencing errors and missing genomes

Publisher

England: BioMed Central Ltd

Journal title

BMC bioinformatics, 2024-04, Vol.25 (S1), p.153-153, Article 153

Language

English

Formats

Publication information

Publisher

England: BioMed Central Ltd

More information

Scope and Contents

Contents

With the rapid increase in throughput of long-read sequencing technologies, recent studies have explored their potential for taxonomic classification by using alignment-based approaches to reduce the impact of higher sequencing error rates. While alignment-based methods are generally slower, k-mer-based taxonomic classifiers can overcome this limit...

Alternative Titles

Full title

MetageNN: a memory-efficient neural network taxonomic classifier robust to sequencing errors and missing genomes

Authors, Artists and Contributors

Identifiers

Primary Identifiers

Record Identifier

TN_cdi_doaj_primary_oai_doaj_org_article_a2533d14f4ce45eeaf6a99a818047d8b

Permalink

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_doaj_primary_oai_doaj_org_article_a2533d14f4ce45eeaf6a99a818047d8b

Other Identifiers

ISSN

1471-2105

E-ISSN

1471-2105

DOI

10.1186/s12859-024-05760-3

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