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A Systematic Evaluation of High-Throughput Sequencing Approaches to Identify Low-Frequency Single Nu...

A Systematic Evaluation of High-Throughput Sequencing Approaches to Identify Low-Frequency Single Nu...

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_doaj_primary_oai_doaj_org_article_d1036efccba94d11a66b4fb4761e7d1a

A Systematic Evaluation of High-Throughput Sequencing Approaches to Identify Low-Frequency Single Nucleotide Variants in Viral Populations

About this item

Full title

A Systematic Evaluation of High-Throughput Sequencing Approaches to Identify Low-Frequency Single Nucleotide Variants in Viral Populations

Publisher

Switzerland: MDPI AG

Journal title

Viruses, 2020-10, Vol.12 (10), p.1187

Language

English

Formats

Publication information

Publisher

Switzerland: MDPI AG

More information

Scope and Contents

Contents

High-throughput sequencing such as those provided by Illumina are an efficient way to understand sequence variation within viral populations. However, challenges exist in distinguishing process-introduced error from biological variance, which significantly impacts our ability to identify sub-consensus single-nucleotide variants (SNVs). Here we have...

Alternative Titles

Full title

A Systematic Evaluation of High-Throughput Sequencing Approaches to Identify Low-Frequency Single Nucleotide Variants in Viral Populations

Identifiers

Primary Identifiers

Record Identifier

TN_cdi_doaj_primary_oai_doaj_org_article_d1036efccba94d11a66b4fb4761e7d1a

Permalink

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_doaj_primary_oai_doaj_org_article_d1036efccba94d11a66b4fb4761e7d1a

Other Identifiers

ISSN

1999-4915

E-ISSN

1999-4915

DOI

10.3390/v12101187

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