Assessment of branch point prediction tools to predict physiological branch points and their alterat...
Assessment of branch point prediction tools to predict physiological branch points and their alteration by variants
About this item
Full title
Author / Creator
Leman, Raphaël , Tubeuf, Hélène , Raad, Sabine , Tournier, Isabelle , Derambure, Céline , Lanos, Raphaël , Gaildrat, Pascaline , Castelain, Gaia , Hauchard, Julie , Killian, Audrey , Baert-Desurmont, Stéphanie , Legros, Angelina , Goardon, Nicolas , Quesnelle, Céline , Ricou, Agathe , Castera, Laurent , Vaur, Dominique , Le Gac, Gérald , Ka, Chandran , Fichou, Yann , Bonnet-Dorion, Françoise , Sevenet, Nicolas , Guillaud-Bataille, Marine , Boutry-Kryza, Nadia , Schultz, Inès , Caux-Moncoutier, Virginie , Rossing, Maria , Walker, Logan C. , Spurdle, Amanda B. , Houdayer, Claude , Martins, Alexandra and Krieger, Sophie
Publisher
England: BioMed Central Ltd
Journal title
Language
English
Formats
Publication information
Publisher
England: BioMed Central Ltd
Subjects
More information
Scope and Contents
Contents
Branch points (BPs) map within short motifs upstream of acceptor splice sites (3'ss) and are essential for splicing of pre-mature mRNA. Several BP-dedicated bioinformatics tools, including HSF, SVM-BPfinder, BPP, Branchpointer, LaBranchoR and RNABPS were developed during the last decade. Here, we evaluated their capability to detect the position of...
Alternative Titles
Full title
Assessment of branch point prediction tools to predict physiological branch points and their alteration by variants
Authors, Artists and Contributors
Author / Creator
Tubeuf, Hélène
Raad, Sabine
Tournier, Isabelle
Derambure, Céline
Lanos, Raphaël
Gaildrat, Pascaline
Castelain, Gaia
Hauchard, Julie
Killian, Audrey
Baert-Desurmont, Stéphanie
Legros, Angelina
Goardon, Nicolas
Quesnelle, Céline
Ricou, Agathe
Castera, Laurent
Vaur, Dominique
Le Gac, Gérald
Ka, Chandran
Fichou, Yann
Bonnet-Dorion, Françoise
Sevenet, Nicolas
Guillaud-Bataille, Marine
Boutry-Kryza, Nadia
Schultz, Inès
Caux-Moncoutier, Virginie
Rossing, Maria
Walker, Logan C.
Spurdle, Amanda B.
Houdayer, Claude
Martins, Alexandra
Krieger, Sophie
Identifiers
Primary Identifiers
Record Identifier
TN_cdi_doaj_primary_oai_doaj_org_article_da6b4502084e4b2a87009788da78c331
Permalink
https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_doaj_primary_oai_doaj_org_article_da6b4502084e4b2a87009788da78c331
Other Identifiers
ISSN
1471-2164
E-ISSN
1471-2164
DOI
10.1186/s12864-020-6484-5
