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Evaluating the Accuracy and Efficiency of Multiple Sequence Alignment Methods

Evaluating the Accuracy and Efficiency of Multiple Sequence Alignment Methods

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_doaj_primary_oai_doaj_org_article_e66632b7d345416ba195418336190fef

Evaluating the Accuracy and Efficiency of Multiple Sequence Alignment Methods

About this item

Full title

Evaluating the Accuracy and Efficiency of Multiple Sequence Alignment Methods

Publisher

SAGE Publishing

Journal title

Evolutionary bioinformatics online, 2014-01, Vol.10

Language

English

Formats

Publication information

Publisher

SAGE Publishing

More information

Scope and Contents

Contents

A comparison of 10 most popular Multiple Sequence Alignment (MSA) tools, namely, MUSCLE, MAFFT(L-INS-i), MAFFT (FFT-NS-2), T-Coffee, ProbCons, SATe, Clustal Omega, Kalign, Multalin, and Dialign-TX is presented. We also focused on the significance of some implementations embedded in algorithm of each tool. Based on 10 simulated trees of different nu...

Alternative Titles

Full title

Evaluating the Accuracy and Efficiency of Multiple Sequence Alignment Methods

Identifiers

Primary Identifiers

Record Identifier

TN_cdi_doaj_primary_oai_doaj_org_article_e66632b7d345416ba195418336190fef

Permalink

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_doaj_primary_oai_doaj_org_article_e66632b7d345416ba195418336190fef

Other Identifiers

E-ISSN

1176-9343

DOI

10.4137/EBO.S19199

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