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An open protocol for modeling T Cell Clonotype repertoires using TCR[beta] CDR3 sequences

An open protocol for modeling T Cell Clonotype repertoires using TCR[beta] CDR3 sequences

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_gale_infotracmisc_A754838155

An open protocol for modeling T Cell Clonotype repertoires using TCR[beta] CDR3 sequences

About this item

Full title

An open protocol for modeling T Cell Clonotype repertoires using TCR[beta] CDR3 sequences

Publisher

BioMed Central Ltd

Journal title

BMC genomics, 2023-06, Vol.24 (1)

Language

English

Formats

Publication information

Publisher

BioMed Central Ltd

More information

Scope and Contents

Contents

T cell receptor repertoires can be profiled using next generation sequencing (NGS) to measure and monitor adaptive dynamical changes in response to disease and other perturbations. Genomic DNA-based bulk sequencing is cost-effective but necessitates multiplex target amplification using multiple primer pairs with highly variable amplification effici...

Alternative Titles

Full title

An open protocol for modeling T Cell Clonotype repertoires using TCR[beta] CDR3 sequences

Identifiers

Primary Identifiers

Record Identifier

TN_cdi_gale_infotracmisc_A754838155

Permalink

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_gale_infotracmisc_A754838155

Other Identifiers

ISSN

1471-2164

E-ISSN

1471-2164

DOI

10.1186/s12864-023-09424-z

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