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A complete workflow for the analysis of full-size ChIP-seq (and similar) data sets using peak-motifs

A complete workflow for the analysis of full-size ChIP-seq (and similar) data sets using peak-motifs

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_hal_primary_oai_HAL_hal_01624286v1

A complete workflow for the analysis of full-size ChIP-seq (and similar) data sets using peak-motifs

About this item

Full title

A complete workflow for the analysis of full-size ChIP-seq (and similar) data sets using peak-motifs

Publisher

London: Nature Publishing Group UK

Journal title

Nature protocols, 2012-08, Vol.7 (8), p.1551-1568

Language

English

Formats

Publication information

Publisher

London: Nature Publishing Group UK

More information

Scope and Contents

Contents

This protocol explains how to use the online integrated pipeline 'peak-motifs' (
http://rsat.ulb.ac.be/rsat/
) to predict motifs and binding sites in full-size peak sets obtained by chromatin immunoprecipitation–sequencing (ChIP-seq) or related technologies. The workflow combines four...

Alternative Titles

Full title

A complete workflow for the analysis of full-size ChIP-seq (and similar) data sets using peak-motifs

Identifiers

Primary Identifiers

Record Identifier

TN_cdi_hal_primary_oai_HAL_hal_01624286v1

Permalink

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_hal_primary_oai_HAL_hal_01624286v1

Other Identifiers

ISSN

1754-2189,1750-2799

E-ISSN

1750-2799

DOI

10.1038/nprot.2012.088

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