Taxonomic assignment of uncultivated prokaryotic virus genomes is enabled by gene-sharing networks
Taxonomic assignment of uncultivated prokaryotic virus genomes is enabled by gene-sharing networks
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Author / Creator
Lawrence Livermore National Laboratory (LLNL), Livermore, CA (United States) , Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States) , Bin Jang, Ho , Bolduc, Benjamin , Zablocki, Olivier , Kuhn, Jens H. , Roux, Simon , Adriaenssens, Evelien M. , Brister, J. Rodney , Kropinski, Andrew M , Krupovic, Mart , Lavigne, Rob , Turner, Dann and Sullivan, Matthew B.
Publisher
New York: Nature Publishing Group US
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Language
English
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Publisher
New York: Nature Publishing Group US
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Scope and Contents
Contents
Microbiomes from every environment contain a myriad of uncultivated archaeal and bacterial viruses, but studying these viruses is hampered by the lack of a universal, scalable taxonomic framework. We present vConTACT v.2.0, a network-based application utilizing whole genome gene-sharing profiles for virus taxonomy that integrates distance-based hie...
Alternative Titles
Full title
Taxonomic assignment of uncultivated prokaryotic virus genomes is enabled by gene-sharing networks
Authors, Artists and Contributors
Author / Creator
Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)
Bin Jang, Ho
Bolduc, Benjamin
Zablocki, Olivier
Kuhn, Jens H.
Roux, Simon
Adriaenssens, Evelien M.
Brister, J. Rodney
Kropinski, Andrew M
Krupovic, Mart
Lavigne, Rob
Turner, Dann
Sullivan, Matthew B.
Identifiers
Primary Identifiers
Record Identifier
TN_cdi_osti_scitechconnect_1580836
Permalink
https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_osti_scitechconnect_1580836
Other Identifiers
ISSN
1087-0156
E-ISSN
1546-1696
DOI
10.1038/s41587-019-0100-8
