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Synthetic Spike-in Standards Improve Run-Specific Systematic Error Analysis for DNA and RNA Sequenci...

Synthetic Spike-in Standards Improve Run-Specific Systematic Error Analysis for DNA and RNA Sequenci...

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_plos_journals_1325521488

Synthetic Spike-in Standards Improve Run-Specific Systematic Error Analysis for DNA and RNA Sequencing

About this item

Full title

Synthetic Spike-in Standards Improve Run-Specific Systematic Error Analysis for DNA and RNA Sequencing

Publisher

United States: Public Library of Science

Journal title

PloS one, 2012-07, Vol.7 (7), p.e41356-e41356

Language

English

Formats

Publication information

Publisher

United States: Public Library of Science

More information

Scope and Contents

Contents

While the importance of random sequencing errors decreases at higher DNA or RNA sequencing depths, systematic sequencing errors (SSEs) dominate at high sequencing depths and can be difficult to distinguish from biological variants. These SSEs can cause base quality scores to underestimate the probability of error at certain genomic positions, resul...

Alternative Titles

Full title

Synthetic Spike-in Standards Improve Run-Specific Systematic Error Analysis for DNA and RNA Sequencing

Identifiers

Primary Identifiers

Record Identifier

TN_cdi_plos_journals_1325521488

Permalink

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_plos_journals_1325521488

Other Identifiers

ISSN

1932-6203

E-ISSN

1932-6203

DOI

10.1371/journal.pone.0041356

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