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AlphaFold-SFA: Accelerated sampling of cryptic pocket opening, protein-ligand binding and allostery...

AlphaFold-SFA: Accelerated sampling of cryptic pocket opening, protein-ligand binding and allostery...

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_plos_journals_3097788420

AlphaFold-SFA: Accelerated sampling of cryptic pocket opening, protein-ligand binding and allostery by AlphaFold, slow feature analysis and metadynamics

About this item

Full title

AlphaFold-SFA: Accelerated sampling of cryptic pocket opening, protein-ligand binding and allostery by AlphaFold, slow feature analysis and metadynamics

Publisher

United States: Public Library of Science

Journal title

PloS one, 2024-08, Vol.19 (8), p.e0307226

Language

English

Formats

Publication information

Publisher

United States: Public Library of Science

More information

Scope and Contents

Contents

Sampling rare events in proteins is crucial for comprehending complex phenomena like cryptic pocket opening, where transient structural changes expose new binding sites. Understanding these rare events also sheds light on protein-ligand binding and allosteric communications, where distant site interactions influence protein function. Traditional un...

Alternative Titles

Full title

AlphaFold-SFA: Accelerated sampling of cryptic pocket opening, protein-ligand binding and allostery by AlphaFold, slow feature analysis and metadynamics

Authors, Artists and Contributors

Identifiers

Primary Identifiers

Record Identifier

TN_cdi_plos_journals_3097788420

Permalink

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_plos_journals_3097788420

Other Identifiers

ISSN

1932-6203

E-ISSN

1932-6203

DOI

10.1371/journal.pone.0307226

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