gapFinisher: a reliable gap filling pipeline for SSPACE-LongRead scaffolder output
gapFinisher: a reliable gap filling pipeline for SSPACE-LongRead scaffolder output
About this item
Full title
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Publisher
San Diego: PeerJ, Inc
Journal title
Language
English
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Publication information
Publisher
San Diego: PeerJ, Inc
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Scope and Contents
Contents
Unknown sequences, or gaps, are largely present in most published genomes across public databases. Gap filling is an important finishing step in de novo genome assembly, especially in large genomes. The gap filling problem is nontrivial and while many computational tools exist partially solving the problem, several have shortcomings as to the relia...
Alternative Titles
Full title
gapFinisher: a reliable gap filling pipeline for SSPACE-LongRead scaffolder output
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Record Identifier
TN_cdi_proquest_journals_1977481881
Permalink
https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_proquest_journals_1977481881
Other Identifiers
E-ISSN
2167-9843
DOI
10.7287/peerj.preprints.3467v1
