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Decomposing the site frequency spectrum: the impact of tree topology on neutrality tests

Decomposing the site frequency spectrum: the impact of tree topology on neutrality tests

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_proquest_journals_2070156293

Decomposing the site frequency spectrum: the impact of tree topology on neutrality tests

About this item

Full title

Decomposing the site frequency spectrum: the impact of tree topology on neutrality tests

Publisher

Cold Spring Harbor: Cold Spring Harbor Laboratory Press

Journal title

bioRxiv, 2017-01

Language

English

Formats

Publication information

Publisher

Cold Spring Harbor: Cold Spring Harbor Laboratory Press

More information

Scope and Contents

Contents

We investigate the dependence of the site frequency spectrum (SFS) on the topological structure of genealogical trees. We show that basic population genetic statistics -- for instance estimators of or neutrality tests such as Tajima's D -- can be decomposed into components of waiting times between coalescent events and of tree topology. Our results...

Alternative Titles

Full title

Decomposing the site frequency spectrum: the impact of tree topology on neutrality tests

Identifiers

Primary Identifiers

Record Identifier

TN_cdi_proquest_journals_2070156293

Permalink

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_proquest_journals_2070156293

Other Identifiers

E-ISSN

2692-8205

DOI

10.1101/042044