GlobalFungi: Global database of fungal records from high-throughput-sequencing metabarcoding studies
GlobalFungi: Global database of fungal records from high-throughput-sequencing metabarcoding studies
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Vetrovsky, Tomas , Morais, Daniel , Kohout, Petr , Lepinay, Clementine , Gallardo, Camelia Algora , Holla, Sandra Awokunle , Bahnmann, Barbara Doreen , Bilohneda, Kveta , Brabcova, Vendula , D'alo, Federica , Zander Rainier Human , Jomura, Mayuko , Kolarik, Miroslav , Kvasnickova, Jana , Llado, Salvador , Lopez-Mondejar, Ruben , Martinovic, Tijana , Masinova, Tereza , Meszarosova, Lenka , Michalcikova, Lenka , Michalova, Tereza , Mundra, Sunil , Navratilova, Diana , Odriozola, Inaki , Piche-Choquette, Sarah , Stursova, Martina , Svec, Karel , Tlaskal, Vojtech , Urbanova, Michaela , Vlk, Lukas , Voriskova, Jana , Zifcakova, Lucia and Baldrian, Petr
Publisher
Cold Spring Harbor: Cold Spring Harbor Laboratory Press
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Cold Spring Harbor: Cold Spring Harbor Laboratory Press
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Contents
Fungi are key players in vital ecosystem services, spanning carbon cycling, decomposition, symbiotic associations with cultural and wild plants and pathogenicity. The high importance of fungi in the ecosystem processes contrasts with the incompleteness of understanding of the patterns of fungal biogeography and the environmental factors that drive it. To close this gap of knowledge, we have here collected and validated data published on the composition of soil fungal communities in terrestrial environments including soil and plant-associated habitats and made them publicly accessible through a user interface at http://globalfungi.com. The GlobalFungi database contains over 650 million observations of fungal sequences across >20 000 samples with geographical locations and additional metadata contained in 207 original studies with millions of unique sequence variants of the fungal internal transcribed spacers (ITS) 1 and 2 representing fungal species and genera. As it is, the study represents the most comprehensive atlas of fungal distribution on the global scale open to further additions. Competing Interest Statement The authors have declared no competing interest. Footnotes * http://globalfungi.com...
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Full title
GlobalFungi: Global database of fungal records from high-throughput-sequencing metabarcoding studies
Authors, Artists and Contributors
Author / Creator
Morais, Daniel
Kohout, Petr
Lepinay, Clementine
Gallardo, Camelia Algora
Holla, Sandra Awokunle
Bahnmann, Barbara Doreen
Bilohneda, Kveta
Brabcova, Vendula
D'alo, Federica
Zander Rainier Human
Jomura, Mayuko
Kolarik, Miroslav
Kvasnickova, Jana
Llado, Salvador
Lopez-Mondejar, Ruben
Martinovic, Tijana
Masinova, Tereza
Meszarosova, Lenka
Michalcikova, Lenka
Michalova, Tereza
Mundra, Sunil
Navratilova, Diana
Odriozola, Inaki
Piche-Choquette, Sarah
Stursova, Martina
Svec, Karel
Tlaskal, Vojtech
Urbanova, Michaela
Vlk, Lukas
Voriskova, Jana
Zifcakova, Lucia
Baldrian, Petr
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TN_cdi_proquest_journals_2394617337
Permalink
https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_proquest_journals_2394617337
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ISSN
2692-8205
E-ISSN
2692-8205
DOI
10.1101/2020.04.24.060384