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ViQUF: de novo Viral Quasispecies reconstruction using Unitig-based Flow networks

ViQUF: de novo Viral Quasispecies reconstruction using Unitig-based Flow networks

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_proquest_journals_2609874864

ViQUF: de novo Viral Quasispecies reconstruction using Unitig-based Flow networks

About this item

Full title

ViQUF: de novo Viral Quasispecies reconstruction using Unitig-based Flow networks

Publisher

Ithaca: Cornell University Library, arXiv.org

Journal title

arXiv.org, 2021-12

Language

English

Formats

Publication information

Publisher

Ithaca: Cornell University Library, arXiv.org

More information

Scope and Contents

Contents

During viral infection, intrahost mutation and recombination can lead to significant evolution, resulting in a population of viruses that harbor multiple haplotypes. The task of reconstructing these haplotypes from short-read sequencing data is called viral quasispecies assembly, and it can be categorized as a multiassembly problem. We consider the...

Alternative Titles

Full title

ViQUF: de novo Viral Quasispecies reconstruction using Unitig-based Flow networks

Authors, Artists and Contributors

Identifiers

Primary Identifiers

Record Identifier

TN_cdi_proquest_journals_2609874864

Permalink

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_proquest_journals_2609874864

Other Identifiers

E-ISSN

2331-8422

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