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Spatial transcriptomics prediction from histology jointly through Transformer and graph neural netwo...

Spatial transcriptomics prediction from histology jointly through Transformer and graph neural netwo...

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_proquest_miscellaneous_2691460340

Spatial transcriptomics prediction from histology jointly through Transformer and graph neural networks

About this item

Full title

Spatial transcriptomics prediction from histology jointly through Transformer and graph neural networks

Publisher

Oxford: Oxford University Press

Journal title

Briefings in bioinformatics, 2022-09, Vol.23 (5)

Language

English

Formats

Publication information

Publisher

Oxford: Oxford University Press

More information

Scope and Contents

Contents

Abstract
The rapid development of spatial transcriptomics allows the measurement of RNA abundance at a high spatial resolution, making it possible to simultaneously profile gene expression, spatial locations of cells or spots, and the corresponding hematoxylin and eosin-stained histology images. It turns promising to predict gene expression from...

Alternative Titles

Full title

Spatial transcriptomics prediction from histology jointly through Transformer and graph neural networks

Identifiers

Primary Identifiers

Record Identifier

TN_cdi_proquest_miscellaneous_2691460340

Permalink

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_proquest_miscellaneous_2691460340

Other Identifiers

ISSN

1467-5463

E-ISSN

1477-4054

DOI

10.1093/bib/bbac297

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