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Pangenome graph construction from genome alignments with Minigraph-Cactus

Pangenome graph construction from genome alignments with Minigraph-Cactus

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_10638906

Pangenome graph construction from genome alignments with Minigraph-Cactus

About this item

Full title

Pangenome graph construction from genome alignments with Minigraph-Cactus

Publisher

New York: Nature Publishing Group US

Journal title

Nature biotechnology, 2024-04, Vol.42 (4), p.663-673

Language

English

Formats

Publication information

Publisher

New York: Nature Publishing Group US

More information

Scope and Contents

Contents

Pangenome references address biases of reference genomes by storing a representative set of diverse haplotypes and their alignment, usually as a graph. Alternate alleles determined by variant callers can be used to construct pangenome graphs, but advances in long-read sequencing are leading to widely available, high-quality phased assemblies. Const...

Alternative Titles

Full title

Pangenome graph construction from genome alignments with Minigraph-Cactus

Identifiers

Primary Identifiers

Record Identifier

TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_10638906

Permalink

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_10638906

Other Identifiers

ISSN

1087-0156

E-ISSN

1546-1696

DOI

10.1038/s41587-023-01793-w

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