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SIRV: spatial inference of RNA velocity at the single-cell resolution

SIRV: spatial inference of RNA velocity at the single-cell resolution

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_11302586

SIRV: spatial inference of RNA velocity at the single-cell resolution

About this item

Full title

SIRV: spatial inference of RNA velocity at the single-cell resolution

Publisher

England: Oxford University Press

Journal title

NAR genomics and bioinformatics, 2024-09, Vol.6 (3), p.lqae100

Language

English

Formats

Publication information

Publisher

England: Oxford University Press

More information

Scope and Contents

Contents

RNA Velocity allows the inference of cellular differentiation trajectories from single-cell RNA sequencing (scRNA-seq) data. It would be highly interesting to study these differentiation dynamics in the spatial context of tissues. Estimating spatial RNA velocities is, however, limited by the inability to spatially capture spliced and unspliced mRNA...

Alternative Titles

Full title

SIRV: spatial inference of RNA velocity at the single-cell resolution

Identifiers

Primary Identifiers

Record Identifier

TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_11302586

Permalink

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_11302586

Other Identifiers

ISSN

2631-9268

E-ISSN

2631-9268

DOI

10.1093/nargab/lqae100

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