Integration of biological networks and gene expression data using Cytoscape
Integration of biological networks and gene expression data using Cytoscape
About this item
Full title
Author / Creator
Cline, Melissa S , Smoot, Michael , Cerami, Ethan , Kuchinsky, Allan , Landys, Nerius , Workman, Chris , Christmas, Rowan , Avila-Campilo, Iliana , Creech, Michael , Gross, Benjamin , Hanspers, Kristina , Isserlin, Ruth , Kelley, Ryan , Killcoyne, Sarah , Lotia, Samad , Maere, Steven , Morris, John , Ono, Keiichiro , Pavlovic, Vuk , Pico, Alexander R , Vailaya, Aditya , Wang, Peng-Liang , Adler, Annette , Conklin, Bruce R , Hood, Leroy , Kuiper, Martin , Sander, Chris , Schmulevich, Ilya , Schwikowski, Benno , Warner, Guy J , Ideker, Trey and Bader, Gary D
Publisher
London: Nature Publishing Group UK
Journal title
Language
English
Formats
Publication information
Publisher
London: Nature Publishing Group UK
Subjects
More information
Scope and Contents
Contents
Cytoscape is a free software package for visualizing, modeling and analyzing molecular and genetic interaction networks. This protocol explains how to use Cytoscape to analyze the results of mRNA expression profiling, and other functional genomics and proteomics experiments, in the context of an interaction network obtained for genes of interest. F...
Alternative Titles
Full title
Integration of biological networks and gene expression data using Cytoscape
Authors, Artists and Contributors
Author / Creator
Smoot, Michael
Cerami, Ethan
Kuchinsky, Allan
Landys, Nerius
Workman, Chris
Christmas, Rowan
Avila-Campilo, Iliana
Creech, Michael
Gross, Benjamin
Hanspers, Kristina
Isserlin, Ruth
Kelley, Ryan
Killcoyne, Sarah
Lotia, Samad
Maere, Steven
Morris, John
Ono, Keiichiro
Pavlovic, Vuk
Pico, Alexander R
Vailaya, Aditya
Wang, Peng-Liang
Adler, Annette
Conklin, Bruce R
Hood, Leroy
Kuiper, Martin
Sander, Chris
Schmulevich, Ilya
Schwikowski, Benno
Warner, Guy J
Ideker, Trey
Bader, Gary D
Identifiers
Primary Identifiers
Record Identifier
TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_3685583
Permalink
https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_3685583
Other Identifiers
ISSN
1754-2189
E-ISSN
1750-2799
DOI
10.1038/nprot.2007.324
