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Motif-based analysis of large nucleotide data sets using MEME-ChIP

Motif-based analysis of large nucleotide data sets using MEME-ChIP

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_4175909

Motif-based analysis of large nucleotide data sets using MEME-ChIP

About this item

Full title

Motif-based analysis of large nucleotide data sets using MEME-ChIP

Publisher

London: Nature Publishing Group UK

Journal title

Nature protocols, 2014-06, Vol.9 (6), p.1428-1450

Language

English

Formats

Publication information

Publisher

London: Nature Publishing Group UK

More information

Scope and Contents

Contents

This protocol enables users to perform
de novo
motif discovery, motif enrichment analysis, motif location analysis, and motif clustering, providing a comprehensive picture of the DNA or RNA motifs that are enriched in the input sequences.
MEME-ChIP is a web-based tool for analyzing motifs in large DNA or RNA data sets. It can analyze peak...

Alternative Titles

Full title

Motif-based analysis of large nucleotide data sets using MEME-ChIP

Authors, Artists and Contributors

Identifiers

Primary Identifiers

Record Identifier

TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_4175909

Permalink

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_4175909

Other Identifiers

ISSN

1754-2189

E-ISSN

1750-2799

DOI

10.1038/nprot.2014.083

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