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A method to predict the impact of regulatory variants from DNA sequence

A method to predict the impact of regulatory variants from DNA sequence

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_4520745

A method to predict the impact of regulatory variants from DNA sequence

About this item

Full title

A method to predict the impact of regulatory variants from DNA sequence

Publisher

New York: Nature Publishing Group US

Journal title

Nature genetics, 2015-08, Vol.47 (8), p.955-961

Language

English

Formats

Publication information

Publisher

New York: Nature Publishing Group US

More information

Scope and Contents

Contents

Michael Beer and colleagues report a metric based on a regulatory region annotation method, gkm-SVM, and use this to predict the effects of regulatory variants from sequencing and DNase I–hypersensitive site data. They apply their method to autoimmune disease GWAS data and report several new predictions for causal SNPs.
Most variants implicated...

Alternative Titles

Full title

A method to predict the impact of regulatory variants from DNA sequence

Identifiers

Primary Identifiers

Record Identifier

TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_4520745

Permalink

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_4520745

Other Identifiers

ISSN

1061-4036

E-ISSN

1546-1718

DOI

10.1038/ng.3331

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