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Integrating mapping-, assembly- and haplotype-based approaches for calling variants in clinical sequ...

Integrating mapping-, assembly- and haplotype-based approaches for calling variants in clinical sequ...

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_4753679

Integrating mapping-, assembly- and haplotype-based approaches for calling variants in clinical sequencing applications

About this item

Full title

Integrating mapping-, assembly- and haplotype-based approaches for calling variants in clinical sequencing applications

Publisher

New York: Nature Publishing Group US

Journal title

Nature genetics, 2014-08, Vol.46 (8), p.912-918

Language

English

Formats

Publication information

Publisher

New York: Nature Publishing Group US

More information

Scope and Contents

Contents

Gerton Lunter and colleagues report Platypus software, which combines a haplotype-based multi-sample variant caller with local sequence assembly in a Bayesian statistical framework. They demonstrate applications to exome and whole-genome data sets, to the identification
de novo
mutations in parent-offspring trios and to the genotyping of HLA...

Alternative Titles

Full title

Integrating mapping-, assembly- and haplotype-based approaches for calling variants in clinical sequencing applications

Identifiers

Primary Identifiers

Record Identifier

TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_4753679

Permalink

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_4753679

Other Identifiers

ISSN

1061-4036

E-ISSN

1546-1718

DOI

10.1038/ng.3036

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