Cadmium-Associated Differential Methylation throughout the Placental Genome: Epigenome-Wide Associat...
Cadmium-Associated Differential Methylation throughout the Placental Genome: Epigenome-Wide Association Study of Two U.S. Birth Cohorts
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United States: National Institute of Environmental Health Sciences
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English
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United States: National Institute of Environmental Health Sciences
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Cadmium (Cd) is a ubiquitous environmental toxicant that can accumulate in the placenta during pregnancy, where it may impair placental function and affect fetal development.
We aimed to investigate Cd-associated variations in placental DNA methylation (DNAM) and associations with gene expression; we also aimed to identify novel pathways involved in Cd-associated reproductive toxicity.
Using placental DNAM and Cd concentrations in the New Hampshire Birth Cohort Study (NHBCS,
=343) and the Rhode Island Child Health Study (RICHS,
=141), we performed an epigenome-wide association study (EWAS) between Cd and DNAM, adjusting for tissue heterogeneity using a reference-free method. Cohort-specific results were aggregated via inverse variance weighted fixed effects meta-analysis, and variably methylated CpGs were associated with gene expression. We then performed functional enrichment analysis and tests for associations between gene expression and birth size metrics.
We identified 17 Cd-associated differentially methylated CpG sites with meta-analysis
-values<1×10
, two of which were within a 5% false discovery rate (FDR). DNAM levels at 9 of the 17 loci were associated with increased expression of 6 genes (5% FDR):
,
,
,
,
, and
. Higher placental expression of
and
and lower expression of
were associated with lower birth weight
-scores (
-values<0.05).
Cd-associated differential DNAM and corresponding DNAM-expression associations were observed at loci involved in inflammatory signaling and cell growth. The expression levels of genes involved in inflammatory signaling (
,
, and
) were also associated with birth weight, suggesting a role for inflammatory processes in Cd-associated reproductive toxicity. https://doi.org/10.1289/EHP2192....
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Full title
Cadmium-Associated Differential Methylation throughout the Placental Genome: Epigenome-Wide Association Study of Two U.S. Birth Cohorts
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TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_6014712
Permalink
https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_6014712
Other Identifiers
ISSN
0091-6765
E-ISSN
1552-9924
DOI
10.1289/EHP2192