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Combining fragment docking with graph theory to improve ligand docking for homology model structures

Combining fragment docking with graph theory to improve ligand docking for homology model structures

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_7544562

Combining fragment docking with graph theory to improve ligand docking for homology model structures

About this item

Full title

Combining fragment docking with graph theory to improve ligand docking for homology model structures

Publisher

Cham: Springer International Publishing

Journal title

Journal of computer-aided molecular design, 2020-12, Vol.34 (12), p.1237-1259

Language

English

Formats

Publication information

Publisher

Cham: Springer International Publishing

More information

Scope and Contents

Contents

Computational protein–ligand docking is well-known to be prone to inaccuracies in input receptor structures, and it is challenging to obtain good docking results with computationally predicted receptor structures (e.g. through homology modeling). Here we introduce a fragment-based docking method and test if it reduces requirements on the accuracy o...

Alternative Titles

Full title

Combining fragment docking with graph theory to improve ligand docking for homology model structures

Authors, Artists and Contributors

Identifiers

Primary Identifiers

Record Identifier

TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_7544562

Permalink

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_7544562

Other Identifiers

ISSN

0920-654X

E-ISSN

1573-4951

DOI

10.1007/s10822-020-00345-7

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