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Kmerator Suite: design of specific k-mer signatures and automatic metadata discovery in large RNA-se...

Kmerator Suite: design of specific k-mer signatures and automatic metadata discovery in large RNA-se...

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_8221386

Kmerator Suite: design of specific k-mer signatures and automatic metadata discovery in large RNA-seq datasets

About this item

Full title

Kmerator Suite: design of specific k-mer signatures and automatic metadata discovery in large RNA-seq datasets

Publisher

Oxford: Oxford University Press

Journal title

NAR Genomics and Bioinformatics, 2021-09, Vol.3 (3), p.lqab058-lqab058

Language

English

Formats

Publication information

Publisher

Oxford: Oxford University Press

More information

Scope and Contents

Contents

The huge body of publicly available RNA-sequencing (RNA-seq) libraries is a treasure of functional information allowing to quantify the expression of known or novel transcripts in tissues. However, transcript quantification commonly relies on alignment methods requiring a lot of computational resources and processing time, which does not scale easi...

Alternative Titles

Full title

Kmerator Suite: design of specific k-mer signatures and automatic metadata discovery in large RNA-seq datasets

Identifiers

Primary Identifiers

Record Identifier

TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_8221386

Permalink

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_8221386

Other Identifiers

ISSN

2631-9268

E-ISSN

2631-9268

DOI

10.1093/nargab/lqab058

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