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Effective gene expression prediction from sequence by integrating long-range interactions

Effective gene expression prediction from sequence by integrating long-range interactions

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_8490152

Effective gene expression prediction from sequence by integrating long-range interactions

About this item

Full title

Effective gene expression prediction from sequence by integrating long-range interactions

Publisher

New York: Nature Publishing Group US

Journal title

Nature methods, 2021-10, Vol.18 (10), p.1196-1203

Language

English

Formats

Publication information

Publisher

New York: Nature Publishing Group US

More information

Scope and Contents

Contents

How noncoding DNA determines gene expression in different cell types is a major unsolved problem, and critical downstream applications in human genetics depend on improved solutions. Here, we report substantially improved gene expression prediction accuracy from DNA sequences through the use of a deep learning architecture, called Enformer, that is...

Alternative Titles

Full title

Effective gene expression prediction from sequence by integrating long-range interactions

Identifiers

Primary Identifiers

Record Identifier

TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_8490152

Permalink

https://devfeature-collection.sl.nsw.gov.au/record/TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_8490152

Other Identifiers

ISSN

1548-7091

E-ISSN

1548-7105

DOI

10.1038/s41592-021-01252-x

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