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79 results for Almeida,+Jonas+S

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Select record 21
ArticlesPeer ReviewedFull Text
Biological sequences as pictures – a generic two dimensional solution for iterated maps
Author / Creator:Almeida, Jonas S ; Vinga, Susana
Publisher:England: BioMed Central Ltd
Journal title:BMC bioinformatics, 2009-03, Vol.10 (1), p.100-100, Article 100
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ArticlesPeer ReviewedFull Text
Automated smoother for the numerical decoupling of dynamics models
Author / Creator:Vilela, Marco ; Borges, Carlos CH ; Vinga, Susana ; Vasconcelos, Ana Tereza R ; Santos, Helena ; Voit, Eberhard O ; Almeida, Jonas S
Publisher:England: BioMed Central Ltd
Journal title:BMC bioinformatics, 2007-08, Vol.8 (1), p.305-305, Article 305
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ArticlesPeer ReviewedFull Text
S3QL: A distributed domain specific language for controlled semantic integration of life sciences data
Author / Creator:Deus, Helena F ; Correa, Miriã C ; Stanislaus, Romesh ; Miragaia, Maria ; Maass, Wolfgang ; de Lencastre, Hermínia ; Fox, Ronan ; Almeida, Jonas S
Publisher:England: BioMed Central Ltd
Journal title:BMC bioinformatics, 2011-07, Vol.12 (1), p.285-285, Article 285
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ArticlesPeer ReviewedFull Text
S3DB core: a framework for RDF generation and management in bioinformatics infrastructures
Author / Creator:Almeida, Jonas S ; Deus, Helena F ; Maass, Wolfgang
Publisher:England: BioMed Central Ltd
Journal title:BMC bioinformatics, 2010-07, Vol.11 (1), p.387-387, Article 387
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ArticlesPeer ReviewedFull Text
Prediction of urinary protein markers in lupus nephritis
Author / Creator:Oates, Jim C. ; Varghese, Sanju ; Bland, Alison M. ; Taylor, Timothy P. ; Self, Sally E. ; Stanislaus, Romesh ; Almeida, Jonas S. ; Arthur, John M.
Publisher:New York, NY: Elsevier Inc
Journal title:Kidney international, 2005-12, Vol.68 (6), p.2588-2592
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Select record 26
ArticlesPeer ReviewedFull Text
Fractal MapReduce decomposition of sequence alignment
Author / Creator:Almeida, Jonas S ; Grüneberg, Alexander ; Maass, Wolfgang ; Vinga, Susana
Publisher:England: BioMed Central Ltd
Journal title:Algorithms for molecular biology, 2012-05, Vol.7 (1), p.12-12, Article 12
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ArticlesPeer ReviewedFull Text
Pattern matching through Chaos Game Representation: bridging numerical and discrete data structures for biological sequence analysis
Author / Creator:Vinga, Susana ; Carvalho, Alexandra M ; Francisco, Alexandre P ; Russo, Luís MS ; Almeida, Jonas S
Publisher:England: BioMed Central Ltd
Journal title:Algorithms for molecular biology, 2012-05, Vol.7 (1), p.10-10, Article 10
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Select record 28
ArticlesPeer ReviewedFull Text
Exploratory Analysis of the Copy Number Alterations in Glioblastoma Multiforme
Author / Creator:Freire, Pablo ; Vilela, Marco ; Deus, Helena ; Kim, Yong-Wan ; Koul, Dimpy ; Colman, Howard ; Aldape, Kenneth D. ; Bogler, Oliver ; Yung, W. K. Alfred ; Coombes, Kevin ; Mills, Gordon B. ; Vasconcelos, Ana T. ; Almeida, Jonas S.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2008-12, Vol.3 (12), p.e4076-e4076
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ArticlesPeer ReviewedFull Text
Identification of neutral biochemical network models from time series data
Author / Creator:Vilela, Marco ; Vinga, Susana ; Maia, Marco A Grivet Mattoso ; Voit, Eberhard O ; Almeida, Jonas S
Publisher:England: BioMed Central Ltd
Journal title:BMC systems biology, 2009-05, Vol.3 (1), p.47-47, Article 47
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Select record 30
ArticlesPeer ReviewedFull Text
Sequence analysis by iterated maps, a review
Author / Creator:Almeida, Jonas S.
Publisher:England: Oxford University Press
Journal title:Briefings in bioinformatics, 2014-05, Vol.15 (3), p.369-375
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Select record 31
ArticlesPeer ReviewedFull Text
cDNA Microarray for Crassostrea virginica and C. gigas
Author / Creator:Jenny, Matthew J ; Chapman, Robert W ; Mancia, Annalaura ; Chen, Yian A ; McKillen, David J ; Trent, Hal ; Lang, Paul ; Escoubas, Jean-Michel ; Bachere, Evelyne ; Boulo, Viviane ; Liu, Z. John ; Gross, Paul S ; Cunningham, Charles ; Cupit, Pauline M ; Tanguy, Arnaud ; Guo, Ximing ; Moraga, Dario ; Boutet, Isabelle ; Huvet, Arnaud ; De Guise, Sylvain ; Almeida, Jonas S ; Warr, Gregory W
Publisher:United States: New York : Springer-Verlag
Journal title:Marine biotechnology (New York, N.Y.), 2007-10, Vol.9 (5), p.577-591
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Select record 32
ArticlesPeer ReviewedFull Text
RPPAML/RIMS: A metadata format and an information management system for reverse phase protein arrays
Author / Creator:Stanislaus, Romesh ; Carey, Mark ; Deus, Helena F ; Coombes, Kevin ; Hennessy, Bryan T ; Mills, Gordon B ; Almeida, Jonas S
Publisher:England: BioMed Central Ltd
Journal title:BMC bioinformatics, 2008-12, Vol.9 (1), p.555-555, Article 555
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ArticlesPeer ReviewedFull Text
A Nonparametric Approach to Detect Nonlinear Correlation in Gene Expression
Author / Creator:Chen, Y. Ann ; Almeida, Jonas S. ; Richards, Adam J. ; Müller, Peter ; Carroll, Raymond J. ; Rohrer, Baerbel
Publisher:United States: Taylor & Francis
Journal title:Journal of computational and graphical statistics, 2010-09, Vol.19 (3), p.552-568
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Select record 34
ArticlesPeer ReviewedFull Text
Associations between actigraphy-measured sleep duration, continuity, and timing with mortality in the UK Biobank
Author / Creator:Saint-Maurice, Pedro F ; Freeman, Joshua R ; Russ, Daniel ; Almeida, Jonas S ; Shams-White, Marissa M ; Patel, Shreya ; Wolff-Hughes, Dana L ; Watts, Eleanor L ; Loftfield, Erikka ; Hong, Hyokyoung G ; Moore, Steven C ; Matthews, Charles E
Publisher:US: Oxford University Press
Journal title:Sleep (New York, N.Y.), 2024-03, Vol.47 (3), p.1
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Select record 35
ArticlesPeer ReviewedFull Text
A Semantic Web Management Model for Integrative Biomedical Informatics
Author / Creator:Deus, Helena F. ; Stanislaus, Romesh ; Veiga, Diogo F. ; Behrens, Carmen ; Wistuba, Ignacio I. ; Minna, John D. ; Garner, Harold R. ; Swisher, Stephen G. ; Roth, Jack A. ; Correa, Arlene M. ; Broom, Bradley ; Coombes, Kevin ; Chang, Allen ; Vogel, Lynn H. ; Almeida, Jonas S.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2008-08, Vol.3 (8), p.e2946-e2946
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Select record 36
ArticlesPeer ReviewedFull Text
Serum profiling by MALDI-TOF mass spectrometry as a diagnostic tool for domoic acid toxicosis in California sea lions
Author / Creator:Neely, Benjamin A ; Soper, Jennifer L ; Greig, Denise J ; Carlin, Kevin P ; Favre, Elizabeth G ; Gulland, Frances MD ; Almeida, Jonas S ; Janech, Michael G
Publisher:England: BioMed Central Ltd
Journal title:Proteome science, 2012-03, Vol.10 (1), p.18-18, Article 18
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Select record 37
ArticlesPeer ReviewedFull Text
MedicaidJS: a FAIR approach to real-time drug analytics
Author / Creator:Agarwal, Kunaal ; Kim, Hae Rin ; Almeida, Jonas S ; Sandoval, Lorena
Publisher:England: Oxford University Press
Journal title:Bioinformatics advances, 2023, Vol.3 (1), p.vbad170-vbad170
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Select record 38
ArticlesPeer ReviewedFull Text
Ranked Adjusted Rand: integrating distance and partition information in a measure of clustering agreement
Author / Creator:Pinto, Francisco R ; Carriço, João A ; Ramirez, Mário ; Almeida, Jonas S
Publisher:England: BioMed Central Ltd
Journal title:BMC bioinformatics, 2007-02, Vol.8 (1), p.44-44, Article 44
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QMachine: commodity supercomputing in web browsers
Author / Creator:Wilkinson, Sean R ; Almeida, Jonas S
Publisher:England: BioMed Central Ltd
Journal title:BMC bioinformatics, 2014-06, Vol.15 (1), p.176-176, Article 176
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Select record 40
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An open-source representation for 2-DE-centric proteomics and support infrastructure for data storage and analysis
Author / Creator:Stanislaus, Romesh ; Arthur, John M ; Rajagopalan, Balaji ; Moerschell, Rick ; McGlothlen, Brian ; Almeida, Jonas S
Publisher:England: BioMed Central Ltd
Journal title:BMC bioinformatics, 2008-01, Vol.9 (1), p.4-4, Article 4
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Showing 21 to 40 of 79 results

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Biological sequences as pictures – a generic two dimensional solution for iterated maps

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Automated smoother for the numerical decoupling of dynamics models

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S3QL: A distributed domain specific language for controlled semantic integration of life sciences data

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S3DB core: a framework for RDF generation and management in bioinformatics infrastructures

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Prediction of urinary protein markers in lupus nephritis

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Fractal MapReduce decomposition of sequence alignment

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Pattern matching through Chaos Game Representation: bridging numerical and discrete data structures for biological sequence analysis

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Exploratory Analysis of the Copy Number Alterations in Glioblastoma Multiforme

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Identification of neutral biochemical network models from time series data

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Sequence analysis by iterated maps, a review

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cDNA Microarray for Crassostrea virginica and C. gigas

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RPPAML/RIMS: A metadata format and an information management system for reverse phase protein arrays

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A Nonparametric Approach to Detect Nonlinear Correlation in Gene Expression

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Associations between actigraphy-measured sleep duration, continuity, and timing with mortality in the UK Biobank

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A Semantic Web Management Model for Integrative Biomedical Informatics

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Serum profiling by MALDI-TOF mass spectrometry as a diagnostic tool for domoic acid toxicosis in California sea lions

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MedicaidJS: a FAIR approach to real-time drug analytics

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Ranked Adjusted Rand: integrating distance and partition information in a measure of clustering agreement

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QMachine: commodity supercomputing in web browsers

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An open-source representation for 2-DE-centric proteomics and support infrastructure for data storage and analysis

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