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Select record 21
ArticlesPeer ReviewedFull Text
Probe-Free Digital PCR Quantitative Methodology to Measure Donor-Specific Cell-Free DNA after Solid-Organ Transplantation
Author / Creator:Goh, Su Kah ; Muralidharan, Vijayaragavan ; Christophi, Christopher ; Do, Hongdo ; Dobrovic, Alexander
Publisher:England: Oxford University Press
Journal title:Clinical chemistry (Baltimore, Md.), 2017-03, Vol.63 (3), p.742-750
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ArticlesPeer ReviewedFull Text
Empirical array quality weights in the analysis of microarray data
Author / Creator:Ritchie, Matthew E ; Diyagama, Dileepa ; Neilson, Jody ; van Laar, Ryan ; Dobrovic, Alexander ; Holloway, Andrew ; Smyth, Gordon K
Publisher:England: BioMed Central Ltd
Journal title:BMC bioinformatics, 2006-05, Vol.7 (1), p.261-261, Article 261
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Limited copy number-high resolution melting (LCN-HRM) enables the detection and identification by sequencing of low level mutations in cancer biopsies
Author / Creator:Do, Hongdo ; Dobrovic, Alexander
Publisher:England: BioMed Central Ltd
Journal title:Molecular cancer, 2009-10, Vol.8 (1), p.82-82
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A new approach to primer design for the control of PCR bias in methylation studies
Author / Creator:Wojdacz, Tomasz K ; Hansen, Lise Lotte ; Dobrovic, Alexander
Publisher:England: BioMed Central Ltd
Journal title:BMC research notes, 2008-07, Vol.1 (1), p.54-54
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Wnt inhibitory factor 1 is epigenetically silenced in human osteosarcoma, and targeted disruption accelerates osteosarcomagenesis in mice
Author / Creator:Kansara, Maya ; Tsang, Michael ; Kodjabachian, Laurent ; Sims, Natalie A ; Trivett, Melanie K ; Ehrich, Mathias ; Dobrovic, Alexander ; Slavin, John ; Choong, Peter F M ; Simmons, Paul J ; Dawid, Igor B ; Thomas, David M
Publisher:United States: American Society for Clinical Investigation
Journal title:The Journal of clinical investigation, 2009-04, Vol.119 (4), p.837-851
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ArticlesPeer ReviewedFull Text
Reducing Artifactual EGFR T790M Mutations in DNA from Formalin-Fixed Paraffin-Embedded Tissue by Use of Thymine-DNA Glycosylase
Author / Creator:Do, Hongdo ; Molania, Ramyar ; Mitchell, Paul L ; Vaiskunaite, Rita ; Murdoch, John D ; Dobrovic, Alexander
Publisher:England
Journal title:Clinical chemistry (Baltimore, Md.), 2017-09, Vol.63 (9), p.1506-1514
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Select record 27
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Breast ductal carcinoma in situ carry mutational driver events representative of invasive breast cancer
Author / Creator:Pang, Jia-Min B ; Savas, Peter ; Fellowes, Andrew P ; Mir Arnau, Gisela ; Kader, Tanjina ; Vedururu, Ravikiran ; Hewitt, Chelsee ; Takano, Elena A ; Byrne, David J ; Choong, David YH ; Millar, Ewan KA ; Lee, C Soon ; O'Toole, Sandra A ; Lakhani, Sunil R ; Cummings, Margaret C ; Mann, G Bruce ; Campbell, Ian G ; Dobrovic, Alexander ; Loi, Sherene ; Gorringe, Kylie L ; Fox, Stephen B
Publisher:New York: Elsevier Inc
Journal title:Modern pathology, 2017-07, Vol.30 (7), p.952-963
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Select record 28
ArticlesPeer ReviewedFull Text
Targeting homologous recombination deficiency in uterine leiomyosarcoma
Author / Creator:Dall, Genevieve ; Vandenberg, Cassandra J ; Nesic, Ksenija ; Ratnayake, Gayanie ; Zhu, Wenying ; Vissers, Joseph H A ; Bedő, Justin ; Penington, Jocelyn ; Wakefield, Matthew J ; Kee, Damien ; Carmagnac, Amandine ; Lim, Ratana ; Shield-Artin, Kristy ; Milesi, Briony ; Lobley, Amanda ; Kyran, Elizabeth L ; O'Grady, Emily ; Tram, Joshua ; Zhou, Warren ; Nugawela, Devindee ; Stewart, Kym Pham ; Caldwell, Reece ; Papadopoulos, Lia ; Ng, Ashley P ; Dobrovic, Alexander ; Fox, Stephen B ; McNally, Orla ; Power, Jeremy D ; Meniawy, Tarek ; Tan, Teng Han ; Collins, Ian M ; Klein, Oliver ; Barnett, Stephen ; Olesen, Inger ; Hamilton, Anne ; Hofmann, Oliver ; Grimmond, Sean ; Papenfuss, Anthony T ; Scott, Clare L ; Barker, Holly E
Publisher:England: BioMed Central Ltd
Journal title:Journal of experimental & clinical cancer research, 2023-05, Vol.42 (1), p.112-20, Article 112
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Select record 29
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The implications of heterogeneous DNA methylation for the accurate quantification of methylation
Author / Creator:Mikeska, Thomas ; Candiloro, Ida L M ; Dobrovic, Alexander
Publisher:England: Future Medicine Ltd
Journal title:Epigenomics, 2010-08, Vol.2 (4), p.561-573
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Select record 30
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The microtubule inhibitor eribulin demonstrates efficacy in platinum-resistant and refractory high-grade serous ovarian cancer patient-derived xenograft models
Author / Creator:Ho, Gwo Yaw ; Vandenberg, Cassandra J. ; Lim, Ratana ; Christie, Elizabeth L. ; Garsed, Dale W. ; Lieschke, Elizabeth ; Nesic, Ksenija ; Kondrashova, Olga ; Ratnayake, Gayanie ; Radke, Marc ; Penington, Jocelyn S. ; Carmagnac, Amandine ; Heong, Valerie ; Kyran, Elizabeth L. ; Zhang, Fan ; Traficante, Nadia ; Huang, Ruby ; Dobrovic, Alexander ; Swisher, Elizabeth M. ; McNally, Orla ; Kee, Damien ; Wakefield, Matthew J. ; Papenfuss, Anthony T. ; Bowtell, David D. L. ; Barker, Holly E. ; Scott, Clare L.
Publisher:London, England: SAGE Publications
Journal title:Therapeutic advances in medical oncology, 2023-01, Vol.15, p.17588359231208674-17588359231208674
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Select record 31
ArticlesPeer ReviewedFull Text
Assessing alternative base substitutions at primer CpG sites to optimise unbiased PCR amplification of methylated sequences
Author / Creator:Candiloro, Ida L M ; Mikeska, Thomas ; Dobrovic, Alexander
Publisher:Germany: BioMed Central
Journal title:Clinical epigenetics, 2017-04, Vol.9 (1), p.31-31, Article 31
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Select record 32
ArticlesPeer ReviewedFull Text
BRCA2 carriers with male breast cancer show elevated tumour methylation
Author / Creator:Deb, Siddhartha ; Gorringe, Kylie L ; Pang, Jia-Min B ; Byrne, David J ; Takano, Elena A ; Investigators, kConFab ; Dobrovic, Alexander ; Fox, Stephen B
Publisher:England: BioMed Central Ltd
Journal title:BMC cancer, 2017-09, Vol.17 (1), p.641-641, Article 641
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Select record 33
ArticlesPeer ReviewedFull Text
HER3 and downstream pathways are involved in colonization of brain metastases from breast cancer
Author / Creator:Da Silva, Leonard ; Simpson, Peter T ; Smart, Chanel E ; Cocciardi, Sibylle ; Waddell, Nic ; Lane, Annette ; Morrison, Brian J ; Vargas, Ana Cristina ; Healey, Sue ; Beesley, Jonathan ; Pakkiri, Pria ; Parry, Suzanne ; Kurniawan, Nyoman ; Reid, Lynne ; Keith, Patricia ; Faria, Paulo ; Pereira, Emilio ; Skalova, Alena ; Bilous, Michael ; Balleine, Rosemary L ; Do, Hongdo ; Dobrovic, Alexander ; Fox, Stephen ; Franco, Marcello ; Reynolds, Brent ; Khanna, Kum Kum ; Cummings, Margaret ; Chenevix-Trench, Georgia ; Lakhani, Sunil R
Publisher:England: BioMed Central Ltd
Journal title:Breast cancer research : BCR, 2010-01, Vol.12 (4), p.R46-R46, Article R46
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Select record 34
ArticlesPeer ReviewedFull Text
Identifying primary and secondary MLH1 epimutation carriers displaying low-level constitutional MLH1 methylation using droplet digital PCR and genome-wide DNA methylation profiling of colorectal cance...
Author / Creator:Joo, Jihoon E ; Mahmood, Khalid ; Walker, Romy ; Georgeson, Peter ; Candiloro, Ida ; Clendenning, Mark ; Como, Julia ; Joseland, Sharelle ; Preston, Susan ; Graversen, Lise ; Wilding, Mathilda ; Field, Michael ; Lemon, Michelle ; Wakeling, Janette ; Marfan, Helen ; Susman, Rachel ; Isbister, Joanne ; Edwards, Emma ; Bowman, Michelle ; Kirk, Judy ; Ip, Emilia ; McKay, Lynne ; Antill, Yoland ; Hopper, John L ; Boussioutas, Alex ; Macrae, Finlay A ; Dobrovic, Alexander ; Jenkins, Mark A ; Rosty, Christophe ; Winship, Ingrid M ; Buchanan, Daniel D
Publisher:Germany: BioMed Central Ltd
Journal title:Clinical epigenetics, 2023-06, Vol.15 (1), p.95-95, Article 95
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ArticlesPeer ReviewedFull Text
Publisher Correction: A reference collection of patient-derived cell line and xenograft models of proneural, classical and mesenchymal glioblastoma
Author / Creator:Stringer, Brett W. ; Day, Bryan W. ; D’Souza, Rochelle C. J. ; Jamieson, Paul R. ; Ensbey, Kathleen S. ; Bruce, Zara C. ; Lim, Yi Chieh ; Goasdoué, Kate ; Offenhäuser, Carolin ; Akgül, Seçkin ; Allan, Suzanne ; Robertson, Thomas ; Lucas, Peter ; Tollesson, Gert ; Campbell, Scott ; Winter, Craig ; Do, Hongdo ; Dobrovic, Alexander ; Inglis, Po-Ling ; Jeffree, Rosalind L. ; Johns, Terrance G. ; Boyd, Andrew W.
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2020-01, Vol.10 (1), p.1185-1185, Article 1185
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Select record 36
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Graft-Derived Cell-Free DNA Quantification following Liver Transplantation Using Tissue-Specific DNA Methylation and Donor-Specific Genotyping Techniques: An Orthogonal Comparison Study
Author / Creator:Cox, Daniel R A ; McClure, Tess ; Zhang, Fan ; Wong, Boris Ka Leong ; Testro, Adam ; Goh, Su Kah ; Muralidharan, Vijayaragavan ; Dobrovic, Alexander
Publisher:Switzerland: MDPI AG
Journal title:Epigenomes, 2023-06, Vol.7 (2), p.11
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Select record 37
ArticlesPeer ReviewedFull Text
High resolution melting for mutation scanning of TP53 exons 5-8
Author / Creator:Krypuy, Michael ; Ahmed, Ahmed Ashour ; Etemadmoghadam, Dariush ; Hyland, Sarah J ; DeFazio, Anna ; Fox, Stephen B ; Brenton, James D ; Bowtell, David D ; Dobrovic, Alexander
Publisher:England: BioMed Central Ltd
Journal title:BMC cancer, 2007-08, Vol.7 (1), p.168-168
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Select record 38
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Bioinformatics pipelines for targeted resequencing and whole-exome sequencing of human and mouse genomes: a virtual appliance approach for instant deployment
Author / Creator:Li, Jason ; Doyle, Maria A ; Saeed, Isaam ; Wong, Stephen Q ; Mar, Victoria ; Goode, David L ; Caramia, Franco ; Doig, Ken ; Ryland, Georgina L ; Thompson, Ella R ; Hunter, Sally M ; Halgamuge, Saman K ; Ellul, Jason ; Dobrovic, Alexander ; Campbell, Ian G ; Papenfuss, Anthony T ; McArthur, Grant A ; Tothill, Richard W
Publisher:United States: Public Library of Science
Journal title:PloS one, 2014-04, Vol.9 (4), p.e95217
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Select record 39
ArticlesPeer ReviewedFull Text
Validation of a primer optimisation matrix to improve the performance of reverse transcription - quantitative real-time PCR assays
Author / Creator:Mikeska, Thomas ; Dobrovic, Alexander
Publisher:England: BioMed Central Ltd
Journal title:BMC research notes, 2009-06, Vol.2 (1), p.112-112
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Select record 40
ArticlesPeer ReviewedFull Text
DNA methylation of the ABO promoter underlies loss of ABO allelic expression in a significant proportion of leukemic patients
Author / Creator:Bianco-Miotto, Tina ; Hussey, Damian J ; Day, Tanya K ; O'Keefe, Denise S ; Dobrovic, Alexander
Publisher:United States: Public Library of Science
Journal title:PloS one, 2009-03, Vol.4 (3), p.e4788-e4788
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Probe-Free Digital PCR Quantitative Methodology to Measure Donor-Specific Cell-Free DNA after Solid-Organ Transplantation

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Empirical array quality weights in the analysis of microarray data

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Limited copy number-high resolution melting (LCN-HRM) enables the detection and identification by sequencing of low level mutations in cancer biopsies

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A new approach to primer design for the control of PCR bias in methylation studies

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Wnt inhibitory factor 1 is epigenetically silenced in human osteosarcoma, and targeted disruption accelerates osteosarcomagenesis in mice

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Reducing Artifactual EGFR T790M Mutations in DNA from Formalin-Fixed Paraffin-Embedded Tissue by Use of Thymine-DNA Glycosylase

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Breast ductal carcinoma in situ carry mutational driver events representative of invasive breast cancer

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Targeting homologous recombination deficiency in uterine leiomyosarcoma

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The implications of heterogeneous DNA methylation for the accurate quantification of methylation

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The microtubule inhibitor eribulin demonstrates efficacy in platinum-resistant and refractory high-grade serous ovarian cancer patient-derived xenograft models

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Assessing alternative base substitutions at primer CpG sites to optimise unbiased PCR amplification of methylated sequences

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BRCA2 carriers with male breast cancer show elevated tumour methylation

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HER3 and downstream pathways are involved in colonization of brain metastases from breast cancer

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Identifying primary and secondary MLH1 epimutation carriers displaying low-level constitutional MLH1 methylation using droplet digital PCR and genome-wide DNA methylation profiling of colorectal cance...

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Publisher Correction: A reference collection of patient-derived cell line and xenograft models of proneural, classical and mesenchymal glioblastoma

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Graft-Derived Cell-Free DNA Quantification following Liver Transplantation Using Tissue-Specific DNA Methylation and Donor-Specific Genotyping Techniques: An Orthogonal Comparison Study

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High resolution melting for mutation scanning of TP53 exons 5-8

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Bioinformatics pipelines for targeted resequencing and whole-exome sequencing of human and mouse genomes: a virtual appliance approach for instant deployment

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Validation of a primer optimisation matrix to improve the performance of reverse transcription - quantitative real-time PCR assays

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DNA methylation of the ABO promoter underlies loss of ABO allelic expression in a significant proportion of leukemic patients

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