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65 results for Rao,+Basuthkar+J

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Select record 21
ArticlesPeer ReviewedFull Text
A Computational Module Assembled from Different Protease Family Motifs Identifies PI PLC from Bacillus cereus as a Putative Prolyl Peptidase with a Serine Protease Scaffold
Author / Creator:Rendón-Ramírez, Adela ; Shukla, Manish ; Oda, Masataka ; Chakraborty, Sandeep ; Minda, Renu ; Dandekar, Abhaya M. ; Ásgeirsson, Bjarni ; Goñi, Félix M. ; Rao, Basuthkar J.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2013-08, Vol.8 (8), p.e70923-e70923
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ArticlesPeer ReviewedFull Text
UVI31+ Is a DNA Endonuclease That Dynamically Localizes to Chloroplast Pyrenoids in C. reinhardtii
Author / Creator:Shukla, Manish ; Minda, Renu ; Singh, Himanshu ; Tirumani, Srikanth ; Chary, Kandala V. R. ; Rao, Basuthkar J.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2012-12, Vol.7 (12), p.e51913-e51913
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ArticlesPeer ReviewedFull Text
Acetate and Bicarbonate Assimilation and Metabolite Formation in Chlamydomonas reinhardtii: A 13C-NMR Study
Author / Creator:Singh, Himanshu ; Shukla, Manish R. ; Chary, Kandala V. R. ; Rao, Basuthkar J.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2014, Vol.9 (9), p.e106457-e106457
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ArticlesPeer ReviewedFull Text
Sequence/structural analysis of xylem proteome emphasizes pathogenesis-related proteins, chitinases and β -1, 3-glucanases as key players in grapevine defense against Xylella fastidiosa
Author / Creator:Chakraborty, Sandeep ; Nascimento, Rafael ; Zaini, Paulo A. ; Gouran, Hossein ; Rao, Basuthkar J. ; Goulart, Luiz R. ; Dandekar, Abhaya M.
Publisher:United States: PeerJ Inc
Journal title:PeerJ (San Francisco, CA), 2016-05, Vol.4, p.e2007-e2007, Article e2007
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Select record 25
ArticlesPeer ReviewedFull Text
Homologous recombination properties of OsRad51, a recombinase from rice
Author / Creator:Rajanikant, Chittela ; Melzer, Michael ; Rao, Basuthkar J ; Sainis, Jayashree K
Publisher:Dordrecht: Dordrecht : Springer Netherlands
Journal title:Plant molecular biology, 2008-11, Vol.68 (4-5), p.479-491
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Select record 26
ArticlesPeer ReviewedFull Text
A comparative approach to elucidate chloroplast genome replication
Author / Creator:Krishnan, Neeraja M ; Rao, Basuthkar J
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2009-05, Vol.10 (1), p.237-237
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Select record 27
ArticlesPeer ReviewedFull Text
PAGAL - Properties and corresponding graphics of alpha helical structures in proteins [version 3; peer review: 2 approved]
Author / Creator:Chakraborty, Sandeep ; Rao, Basuthkar J ; Dandekar, Abhaya M
Publisher:F1000 Research Ltd
Journal title:F1000 research, 2015-02, Vol.3, p.206
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Select record 28
ArticlesPeer ReviewedFull Text
Relationship between mRNA secondary structure and sequence variability in Chloroplast genes: possible life history implications
Author / Creator:Krishnan, Neeraja M ; Seligmann, Hervé ; Rao, Basuthkar J
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2008-01, Vol.9 (1), p.48-48, Article 48
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Select record 29
ArticlesPeer ReviewedFull Text
ATR kinase regulates its attenuation via PPM1D phosphatase recruitment to chromatin during recovery from DNA replication stress signalling
Author / Creator:Bhattacharya, Debadrita ; Hiregange, Disha ; Rao, Basuthkar J
Publisher:New Delhi: Springer India
Journal title:Journal of biosciences, 2018-03, Vol.43 (1), p.25-47
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Select record 30
ArticlesPeer ReviewedFull Text
The Type II Secreted Lipase/Esterase LesA is a Key Virulence Factor Required for Xylella fastidiosa Pathogenesis in Grapevines
Author / Creator:Nascimento, Rafael ; Gouran, Hossein ; Chakraborty, Sandeep ; Gillespie, Hyrum W. ; Almeida-Souza, Hebréia O. ; Tu, Aye ; Rao, Basuthkar J. ; Feldstein, Paul A. ; Bruening, George ; Goulart, Luiz R. ; Dandekar, Abhaya M.
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2016-01, Vol.6 (1), p.18598-18598, Article 18598
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Select record 31
ArticlesPeer ReviewedFull Text
Elucidation and genetic intervention of CO2 concentration mechanism in Chlamydomonas reinhardtii for increased plant primary productivity
Author / Creator:Mallikarjuna, Kokkanti ; Narendra, Kelam ; Ragalatha, Ragireddypalem ; Rao, Basuthkar J
Publisher:New Delhi: Springer India
Journal title:Journal of biosciences, 2020-12, Vol.45 (1), Article 115
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Select record 32
ArticlesPeer ReviewedFull Text
YeATS - a tool suite for analyzing RNA-seq derived transcriptome identifies a highly transcribed putative extensin in heartwood/sapwood transition zone in black walnut [version 2; peer review: 3 appro...
Author / Creator:Chakraborty, Sandeep ; Britton, Monica ; Wegrzyn, Jill ; Butterfield, Timothy ; Martínez-García, Pedro José ; Reagan, Russell L ; Rao, Basuthkar J ; Leslie, Charles A ; Aradhaya, Mallikarjuna ; Neale, David ; Woeste, Keith ; Dandekar, Abhaya M
Publisher:England: Faculty of 1000 Ltd
Journal title:F1000 research, 2015, Vol.4, p.155-155
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Select record 33
ArticlesPeer ReviewedFull Text
Protein structure quality assessment based on the distance profiles of consecutive backbone Cα atoms
Author / Creator:Chakraborty, Sandeep ; Venkatramani, Ravindra ; Rao, Basuthkar J ; Asgeirsson, Bjarni ; Dandekar, Abhaya M
Publisher:London: Faculty of 1000 Ltd
Journal title:F1000 research, 2013-01, Vol.2, p.211-211
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Select record 34
ArticlesPeer ReviewedFull Text
Characterizing alpha helical properties of Ebola viral proteins as potential targets for inhibition of alpha-helix mediated protein-protein interactions
Author / Creator:Chakraborty, Sandeep ; Rao, Basuthkar J. ; Asgeirsson, Bjarni ; Dandekar, Abhaya M.
Publisher:England: Faculty of 1000 Ltd
Journal title:F1000 research, 2014, Vol.3, p.251
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Select record 35
ArticlesPeer ReviewedFull Text
The dipeptidyl peptidase IV inhibitors vildagliptin and K-579 inhibit a phospholipase C: a case of promiscuous scaffolds in proteins [version 3; peer review: 2 approved]
Author / Creator:Chakraborty, Sandeep ; Rendón-Ramírez, Adela ; Ásgeirsson, Bjarni ; Dutta, Mouparna ; Ghosh, Anindya S. ; Oda, Masataka ; Venkatramani, Ravindra ; Rao, Basuthkar J. ; Dandekar, Abhaya M. ; Goñi, Félix M.
Publisher:London, UK: F1000Research
Journal title:F1000 research, 2015-01, Vol.2, p.286
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Select record 36
ArticlesPeer ReviewedFull Text
Regulation of CCM genes in Chlamydomonas reinhardtii during conditions of light–dark cycles in synchronous cultures
Author / Creator:Tirumani, Srikanth ; Kokkanti, Mallikarjuna ; Chaudhari, Vishal ; Shukla, Manish ; Rao, Basuthkar J
Publisher:Dordrecht: Springer-Verlag
Journal title:Plant molecular biology, 2014-06, Vol.85 (3), p.277-286
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Select record 37
ArticlesPeer ReviewedFull Text
The PDB database is a rich source of alpha-helical anti-microbial peptides to combat disease causing pathogens
Author / Creator:Chakraborty, Sandeep ; Phu, My ; de Morais, Tâmara Prado ; Nascimento, Rafael ; Goulart, Luiz Ricardo ; Rao, Basuthkar J. ; Asgeirsson, Bjarni ; Dandekar, Abhaya M.
Publisher:London: Faculty of 1000 Ltd
Journal title:F1000 research, 2014-01, Vol.3, p.295-295
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Select record 38
ArticlesPeer ReviewedFull Text
Directed evolution induces tributyrin hydrolysis in a virulence factor of Xylella fastidiosa using a duplicated gene as a template [version 1; peer review: 2 approved]
Author / Creator:Gouran, Hossein ; Chakraborty, Sandeep ; Rao, Basuthkar J ; Asgeirsson, Bjarni ; Dandekar, Abhaya M
Publisher:England: Faculty of 1000 Ltd
Journal title:F1000 research, 2014, Vol.3, p.215-215
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Select record 39
ArticlesPeer ReviewedFull Text
The electrostatic profile of consecutive Cβ atoms applied to protein structure quality assessment [version 3; peer review: 2 approved]
Author / Creator:Chakraborty, Sandeep ; Venkatramani, Ravindra ; Rao, Basuthkar J. ; Asgeirsson, Bjarni ; Dandekar, Abhaya M.
Publisher:England: F1000Research
Journal title:F1000 research, 2013, Vol.2, p.243
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Select record 40
ArticlesPeer ReviewedFull Text
Protein structure quality assessment based on the distance profiles of consecutive backbone Cα atoms [version 2; peer review: 2 approved]
Author / Creator:Chakraborty, Sandeep ; Venkatramani, Ravindra ; Rao, Basuthkar J. ; Asgeirsson, Bjarni ; Dandekar, Abhaya M.
Publisher:England: F1000 Research Ltd
Journal title:F1000 research, 2013, Vol.2, p.211
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Showing 21 to 40 of 65 results

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A Computational Module Assembled from Different Protease Family Motifs Identifies PI PLC from Bacillus cereus as a Putative Prolyl Peptidase with a Serine Protease Scaffold

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UVI31+ Is a DNA Endonuclease That Dynamically Localizes to Chloroplast Pyrenoids in C. reinhardtii

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Acetate and Bicarbonate Assimilation and Metabolite Formation in Chlamydomonas reinhardtii: A 13C-NMR Study

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Sequence/structural analysis of xylem proteome emphasizes pathogenesis-related proteins, chitinases and β -1, 3-glucanases as key players in grapevine defense against Xylella fastidiosa

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Homologous recombination properties of OsRad51, a recombinase from rice

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A comparative approach to elucidate chloroplast genome replication

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PAGAL - Properties and corresponding graphics of alpha helical structures in proteins [version 3; peer review: 2 approved]

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Relationship between mRNA secondary structure and sequence variability in Chloroplast genes: possible life history implications

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ATR kinase regulates its attenuation via PPM1D phosphatase recruitment to chromatin during recovery from DNA replication stress signalling

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The Type II Secreted Lipase/Esterase LesA is a Key Virulence Factor Required for Xylella fastidiosa Pathogenesis in Grapevines

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Elucidation and genetic intervention of CO2 concentration mechanism in Chlamydomonas reinhardtii for increased plant primary productivity

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YeATS - a tool suite for analyzing RNA-seq derived transcriptome identifies a highly transcribed putative extensin in heartwood/sapwood transition zone in black walnut [version 2; peer review: 3 appro...

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Protein structure quality assessment based on the distance profiles of consecutive backbone Cα atoms

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Characterizing alpha helical properties of Ebola viral proteins as potential targets for inhibition of alpha-helix mediated protein-protein interactions

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The dipeptidyl peptidase IV inhibitors vildagliptin and K-579 inhibit a phospholipase C: a case of promiscuous scaffolds in proteins [version 3; peer review: 2 approved]

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Regulation of CCM genes in Chlamydomonas reinhardtii during conditions of light–dark cycles in synchronous cultures

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The PDB database is a rich source of alpha-helical anti-microbial peptides to combat disease causing pathogens

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Directed evolution induces tributyrin hydrolysis in a virulence factor of Xylella fastidiosa using a duplicated gene as a template [version 1; peer review: 2 approved]

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The electrostatic profile of consecutive Cβ atoms applied to protein structure quality assessment [version 3; peer review: 2 approved]

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Protein structure quality assessment based on the distance profiles of consecutive backbone Cα atoms [version 2; peer review: 2 approved]

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