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Reconstruction and analysis of a Kluyveromyces marxianus genome-scale metabolic model
Author / Creator:Marcišauskas, Simonas ; Ji, Boyang ; Nielsen, Jens
Publisher:England: BioMed Central Ltd
Journal title:BMC bioinformatics, 2019-11, Vol.20 (1), p.551-9, Article 551
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C4GEM, a Genome-Scale Metabolic Model to Study C₄ Plant Metabolism
Author / Creator:de Oliveira Dal'Molin, Cristiana Gomes ; Quek, Lake-Ee ; Palfreyman, Robin William ; Brumbley, Stevens Michael ; Nielsen, Lars Keld
Publisher:Rockville, MD: American Society of Plant Biologists
Journal title:Plant physiology (Bethesda), 2010-12, Vol.154 (4), p.1871-1885
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iMM1865: A New Reconstruction of Mouse Genome-Scale Metabolic Model
Author / Creator:Khodaee, Saeideh ; Asgari, Yazdan ; Totonchi, Mehdi ; Karimi-Jafari, Mohammad Hossein
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2020-04, Vol.10 (1), p.6177-6177, Article 6177
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Yeast9: a consensus genome-scale metabolic model for S. cerevisiae curated by the community
Author / Creator:Zhang, Chengyu ; Sánchez, Benjamín J ; Li, Feiran ; Eiden, Cheng Wei Quan ; Scott, William T ; Liebal, Ulf W ; Blank, Lars M ; Mengers, Hendrik G ; Anton, Mihail ; Rangel, Albert Tafur ; Mendoza, Sebastián N ; Zhang, Lixin ; Nielsen, Jens ; Lu, Hongzhong ; Kerkhoven, Eduard J
Publisher:London: Nature Publishing Group UK
Journal title:Molecular systems biology, 2024-10, Vol.20 (10), p.1134-1150
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Reconstruction and analysis of a genome‐scale metabolic model for Agrobacterium tumefaciens
Author / Creator:Xu, Nan ; Yang, Qiyuan ; Yang, Xiaojing ; Wang, Mingqi ; Guo, Minliang
Publisher:Oxford: John Wiley & Sons, Inc
Journal title:Molecular plant pathology, 2021-03, Vol.22 (3), p.348-360
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RBC-GEM: A genome-scale metabolic model for systems biology of the human red blood cell
Author / Creator:Haiman, Zachary B. ; Key, Alicia ; D’Alessandro, Angelo ; Palsson, Bernhard O.
Publisher:United States: Public Library of Science
Journal title:PLoS computational biology, 2025-03, Vol.21 (3), p.e1012109
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Integration of enzymatic data in Bacillus subtilis genome-scale metabolic model improves phenotype predictions and enables in silico design of poly-[gamma]-glutamic acid production strains
Author / Creator:Massaiu, Ilaria ; Pasotti, Lorenzo ; Sonnenschein, Nikolaus ; Rama, Erlinda ; Cavaletti, Matteo ; Magni, Paolo ; Calvio, Cinzia ; Herrgård, Markus J
Publisher:BioMed Central Ltd
Journal title:Microbial cell factories, 2019-01, Vol.18 (1)
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Genome Scale Metabolic Model of the versatile methanotroph Methylocella silvestris
Author / Creator:Bordel, Sergio ; Crombie, Andrew T. ; Muñoz, Raúl ; Murrell, J. Colin
Publisher:England: BioMed Central Ltd
Journal title:Microbial cell factories, 2020-07, Vol.19 (1), p.144-144, Article 144
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Integrating gene expression data into a genome-scale metabolic model to identify reprogramming during adaptive evolution
Author / Creator:Yazdanpanah, Shaghayegh ; Motamedian, Ehsan ; Shojaosadati, Seyed Abbas
Publisher:San Francisco: Public Library of Science
Journal title:PloS one, 2023-10, Vol.18 (10), p.e0292433-e0292433
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A diel multi-tissue genome-scale metabolic model of Vitis vinifera
Author / Creator:Sampaio, Marta ; Rocha, Miguel ; Dias, Oscar
Publisher:United States: Public Library of Science (PLOS)
Journal title:PLoS computational biology, 2024-10, Vol.20 (10), p.e1012506
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Integration of enzyme constraints in a genome-scale metabolic model of Aspergillus niger improves phenotype predictions
Author / Creator:Zhou, Jingru ; Zhuang, Yingping ; Xia, Jianye
Publisher:London: BioMed Central Ltd
Journal title:Microbial cell factories, 2021-06, Vol.20 (1), p.1-125, Article 125
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Reconstruction and Analysis of a Genome-Scale Metabolic Model of Acinetobacter lwoffii
Author / Creator:Xu, Nan ; Zuo, Jiaojiao ; Li, Chenghao ; Gao, Cong ; Guo, Minliang
Publisher:Switzerland: MDPI AG
Journal title:International journal of molecular sciences, 2024-09, Vol.25 (17), p.9321
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Genome-Scale Metabolic Model Accurately Predicts Fluxes in Central Carbon Metabolism under Stress Conditions
Author / Creator:Williams, Thomas C.R ; Poolman, Mark G ; Howden, Andrew J.M ; Schwarzlander, Markus ; Fell, David A ; Ratcliffe, R. George ; Sweetlove, Lee J
Publisher:Rockville, MD: American Society of Plant Biologists
Journal title:Plant physiology (Bethesda), 2010-09, Vol.154 (1), p.311-323
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Genome-scale metabolic model of the diatom Thalassiosira pseudonana highlights the importance of nitrogen and sulfur metabolism in redox balance
Author / Creator:van Tol, Helena M. ; Armbrust, E. Virginia
Publisher:United States: Public Library of Science
Journal title:PloS one, 2021-03, Vol.16 (3), p.e0241960-e0241960
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Genome-Scale Metabolic Model for the Green Alga Chlorella vulgaris UTEX 395 Accurately Predicts Phenotypes under Autotrophic, Heterotrophic, and Mixotrophic Growth Conditions
Author / Creator:Zuñiga, Cristal ; Li, Chien-Ting ; Huelsman, Tyler ; Levering, Jennifer ; Zielinski, Daniel C. ; McConnell, Brian O. ; Long, Christopher P. ; Knoshaug, Eric P. ; Guarnieri, Michael T. ; Antoniewicz, Maciek R. ; Betenbaugh, Michael J. ; Zengler, Karsten
Publisher:United States: American Society of Plant Biologists
Journal title:Plant physiology (Bethesda), 2016-09, Vol.172 (1), p.589-602
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Reconstruction of a Genome Scale Metabolic Model of the polyhydroxybutyrate producing methanotroph Methylocystis parvus OBBP
Author / Creator:Bordel, Sergio ; Rojas, Antonia ; Muñoz, Raúl
Publisher:England: BioMed Central Ltd
Journal title:Microbial cell factories, 2019-06, Vol.18 (1), p.104-104, Article 104
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The first multi-tissue genome-scale metabolic model of a woody plant highlights suberin biosynthesis pathways in Quercus suber
Author / Creator:Cunha, Emanuel ; Silva, Miguel ; Chaves, Inês ; Demirci, Huseyin ; Lagoa, Davide Rafael ; Lima, Diogo ; Rocha, Miguel ; Rocha, Isabel ; Dias, Oscar
Publisher:San Francisco: Public Library of Science
Journal title:PLoS computational biology, 2023-09, Vol.19 (9), p.e1011499-e1011499
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Select record 38
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AraRoot—a comprehensive genome-scale metabolic model for the Arabidopsis root system
Author / Creator:Esterhuizen, Lohani ; Ampimah, Nicholas ; Yandeau-Nelson, Marna D ; Nikolau, Basil J ; Sparks, Erin E ; Saha, Rajib
Journal title:in silico plants, 2025-01, Vol.7 (1)
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Select record 39
ArticlesPeer ReviewedFull Text
Integration of enzymatic data in Bacillus subtilis genome-scale metabolic model improves phenotype predictions and enables in silico design of poly-γ-glutamic acid production strains
Author / Creator:Massaiu, Ilaria ; Pasotti, Lorenzo ; Sonnenschein, Nikolaus ; Rama, Erlinda ; Cavaletti, Matteo ; Magni, Paolo ; Calvio, Cinzia ; Herrgård, Markus J.
Publisher:England: BioMed Central
Journal title:Microbial cell factories, 2019-01, Vol.18 (1), p.3-3, Article 3
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Select record 40
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A genome-scale metabolic model of potato late blight suggests a photosynthesis suppression mechanism
Author / Creator:Botero, Kelly ; Restrepo, Silvia ; Pinzón, Andres
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2018-12, Vol.19 (S8), p.863-863, Article 863
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Showing 21 to 40 of 1,253 results

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Reconstruction and analysis of a Kluyveromyces marxianus genome-scale metabolic model

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C4GEM, a Genome-Scale Metabolic Model to Study C₄ Plant Metabolism

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iMM1865: A New Reconstruction of Mouse Genome-Scale Metabolic Model

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Yeast9: a consensus genome-scale metabolic model for S. cerevisiae curated by the community

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Reconstruction and analysis of a genome‐scale metabolic model for Agrobacterium tumefaciens

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RBC-GEM: A genome-scale metabolic model for systems biology of the human red blood cell

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Integration of enzymatic data in Bacillus subtilis genome-scale metabolic model improves phenotype predictions and enables in silico design of poly-[gamma]-glutamic acid production strains

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Genome Scale Metabolic Model of the versatile methanotroph Methylocella silvestris

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Integrating gene expression data into a genome-scale metabolic model to identify reprogramming during adaptive evolution

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A diel multi-tissue genome-scale metabolic model of Vitis vinifera

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Integration of enzyme constraints in a genome-scale metabolic model of Aspergillus niger improves phenotype predictions

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Reconstruction and Analysis of a Genome-Scale Metabolic Model of Acinetobacter lwoffii

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Genome-Scale Metabolic Model Accurately Predicts Fluxes in Central Carbon Metabolism under Stress Conditions

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Genome-scale metabolic model of the diatom Thalassiosira pseudonana highlights the importance of nitrogen and sulfur metabolism in redox balance

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Genome-Scale Metabolic Model for the Green Alga Chlorella vulgaris UTEX 395 Accurately Predicts Phenotypes under Autotrophic, Heterotrophic, and Mixotrophic Growth Conditions

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Reconstruction of a Genome Scale Metabolic Model of the polyhydroxybutyrate producing methanotroph Methylocystis parvus OBBP

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The first multi-tissue genome-scale metabolic model of a woody plant highlights suberin biosynthesis pathways in Quercus suber

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AraRoot—a comprehensive genome-scale metabolic model for the Arabidopsis root system

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Integration of enzymatic data in Bacillus subtilis genome-scale metabolic model improves phenotype predictions and enables in silico design of poly-γ-glutamic acid production strains

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A genome-scale metabolic model of potato late blight suggests a photosynthesis suppression mechanism

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