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ArticlesPeer ReviewedFull Text
Explosive cell lysis as a mechanism for the biogenesis of bacterial membrane vesicles and biofilms
Author / Creator:Turnbull, Lynne ; Toyofuku, Masanori ; Hynen, Amelia L. ; Kurosawa, Masaharu ; Pessi, Gabriella ; Petty, Nicola K. ; Osvath, Sarah R. ; Cárcamo-Oyarce, Gerardo ; Gloag, Erin S. ; Shimoni, Raz ; Omasits, Ulrich ; Ito, Satoshi ; Yap, Xinhui ; Monahan, Leigh G. ; Cavaliere, Rosalia ; Ahrens, Christian H. ; Charles, Ian G. ; Nomura, Nobuhiko ; Eberl, Leo ; Whitchurch, Cynthia B.
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2016-04, Vol.7 (1), p.11220-11220, Article 11220
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ArticlesPeer ReviewedFull Text
Long-read based de novo assembly of low-complexity metagenome samples results in finished genomes and reveals insights into strain diversity and an active phage system
Author / Creator:Somerville, Vincent ; Lutz, Stefanie ; Schmid, Michael ; Frei, Daniel ; Moser, Aline ; Irmler, Stefan ; Frey, Jürg E. ; Ahrens, Christian H.
Publisher:England: BioMed Central Ltd
Journal title:BMC microbiology, 2019-06, Vol.19 (1), p.143-18, Article 143
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ArticlesPeer ReviewedFull Text
Identification and Functional Characterization of N-Terminally Acetylated Proteins in Drosophila melanogaster
Author / Creator:Goetze, Sandra ; Qeli, Ermir ; Mosimann, Christian ; Staes, An ; Gerrits, Bertran ; Roschitzki, Bernd ; Mohanty, Sonali ; Niederer, Eva M. ; Laczko, Endre ; Timmerman, Evy ; Lange, Vinzenz ; Hafen, Ernst ; Aebersold, Ruedi ; Vandekerckhove, Joël ; Basler, Konrad ; Ahrens, Christian H. ; Gevaert, Kris ; Brunner, Erich
Publisher:United States: Public Library of Science
Journal title:PLoS biology, 2009-11, Vol.7 (11), p.e1000236-e1000236
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ArticlesPeer ReviewedFull Text
Genome-wide transcription start site mapping of Bradyrhizobium japonicum grown free-living or in symbiosis – a rich resource to identify new transcripts, proteins and to study gene regulation
Author / Creator:Čuklina, Jelena ; Hahn, Julia ; Imakaev, Maxim ; Omasits, Ulrich ; Förstner, Konrad U. ; Ljubimov, Nikolay ; Goebel, Melanie ; Pessi, Gabriella ; Fischer, Hans-Martin ; Ahrens, Christian H. ; Gelfand, Mikhail S. ; Evguenieva-Hackenberg, Elena
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2016-04, Vol.17 (1), p.302-302, Article 302
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ArticlesPeer ReviewedFull Text
The AHL- and BDSF-Dependent Quorum Sensing Systems Control Specific and Overlapping Sets of Genes in Burkholderia cenocepacia H111
Author / Creator:Schmid, Nadine ; Pessi, Gabriella ; Deng, Yinyue ; Aguilar, Claudio ; Carlier, Aurelien L. ; Grunau, Alexander ; Omasits, Ulrich ; Zhang, Lian-Hui ; Ahrens, Christian H. ; Eberl, Leo
Publisher:United States: Public Library of Science
Journal title:PloS one, 2012-11, Vol.7 (11), p.e49966-e49966
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ArticlesPeer ReviewedFull Text
Genome assembly and annotation of Meloidogyne enterolobii, an emerging parthenogenetic root-knot nematode
Author / Creator:Koutsovoulos, Georgios D ; Poullet, Marine ; Elashry, Abdelnaser ; Kozlowski, Djampa K L ; Sallet, Erika ; Da Rocha, Martine ; Perfus-Barbeoch, Laetitia ; Martin-Jimenez, Cristina ; Frey, Juerg Ernst ; Ahrens, Christian H ; Kiewnick, Sebastian ; Danchin, Etienne G J
Publisher:England: Nature Publishing Group
Journal title:Scientific data, 2020-10, Vol.7 (1), p.324-324
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ArticlesPeer ReviewedFull Text
Response of Burkholderia cenocepacia H111 to Micro-Oxia
Author / Creator:Pessi, Gabriella ; Braunwalder, Rubina ; Grunau, Alexander ; Omasits, Ulrich ; Ahrens, Christian H. ; Eberl, Leo
Publisher:United States: Public Library of Science
Journal title:PloS one, 2013-09, Vol.8 (9), p.e72939-e72939
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ArticlesPeer ReviewedFull Text
The Hemolymph Proteome of Fed and Starved Drosophila Larvae
Author / Creator:Handke, Björn ; Poernbacher, Ingrid ; Goetze, Sandra ; Ahrens, Christian H. ; Omasits, Ulrich ; Marty, Florian ; Simigdala, Nikiana ; Meyer, Imke ; Wollscheid, Bernd ; Brunner, Erich ; Hafen, Ernst ; Lehner, Christian F.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2013-06, Vol.8 (6), p.e67208-e67208
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ArticlesPeer ReviewedFull Text
Retraction Note: Genome assembly and annotation of Meloidogyne enterolobii, an emerging parthenogenetic root-knot nematode
Author / Creator:Koutsovoulos, Georgios D. ; Poullet, Marine ; Elashry, Abdelnaser ; Kozlowski, Djampa K. L. ; Sallet, Erika ; Da Rocha, Martine ; Perfus-Barbeoch, Laetitia ; Martin-Jimenez, Cristina ; Frey, Juerg Ernst ; Ahrens, Christian H. ; Kiewnick, Sebastian ; Danchin, Etienne G. J.
Publisher:London: Nature Publishing Group UK
Journal title:Scientific data, 2025-01, Vol.12 (1), p.183-1, Article 183
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ArticlesPeer ReviewedFull Text
A Novel Robust Screening Assay Identifies Pseudomonas Strains as Reliable Antagonists of the Root-Knot Nematode Meloidogyne incognita
Author / Creator:Stucky, Tobias ; Hochstrasser, Miro ; Meyer, Silvan ; Segessemann, Tina ; Ruthes, Andrea Caroline ; Ahrens, Christian H. ; Pelludat, Cosima ; Dahlin, Paul
Publisher:Basel: MDPI AG
Journal title:Microorganisms (Basel), 2023-08, Vol.11 (8), p.2011
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ArticlesPeer ReviewedFull Text
A Mighty Small Heart: The Cardiac Proteome of Adult Drosophila melanogaster
Author / Creator:Cammarato, Anthony ; Ahrens, Christian H. ; Alayari, Nakissa N. ; Qeli, Ermir ; Rucker, Jasma ; Reedy, Mary C. ; Zmasek, Christian M. ; Gucek, Marjan ; Cole, Robert N. ; Van Eyk, Jennifer E. ; Bodmer, Rolf ; O'Rourke, Brian ; Bernstein, Sanford I. ; Foster, D. Brian
Publisher:United States: Public Library of Science
Journal title:PloS one, 2011-04, Vol.6 (4), p.e18497
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ArticlesPeer ReviewedFull Text
Protein and gene model inference based on statistical modeling in k-partite graphs
Author / Creator:Gerster, Sarah ; Qeli, Ermir ; Ahrens, Christian H. ; Bühlmann, Peter ; Bickel, Peter J.
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2010-07, Vol.107 (27), p.12101-12106
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ArticlesPeer ReviewedFull Text
Competition assays and physiological experiments of soil and phyllosphere yeasts identify Candida subhashii as a novel antagonist of filamentous fungi
Author / Creator:Hilber-Bodmer, Maja ; Schmid, Michael ; Ahrens, Christian H. ; Freimoser, Florian M.
Publisher:England: BioMed Central Ltd
Journal title:BMC microbiology, 2017-01, Vol.17 (1), p.4, Article 4
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ArticlesPeer ReviewedFull Text
PeptideClassifier for protein inference and targeted quantitative proteomics
Author / Creator:Qeli, Ermir ; Ahrens, Christian H
Publisher:New York: Nature Publishing Group US
Journal title:Nature biotechnology, 2010-07, Vol.28 (7), p.647-650
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ArticlesPeer ReviewedFull Text
Role of the flagellar hook in the structural development and antibiotic tolerance of Pseudomonas aeruginosa biofilms
Author / Creator:Valentin, Jules D. P. ; Straub, Hervé ; Pietsch, Franziska ; Lemare, Marion ; Ahrens, Christian H. ; Schreiber, Frank ; Webb, Jeremy S. ; van der Mei, Henny C. ; Ren, Qun
Publisher:London: Nature Publishing Group UK
Journal title:The ISME Journal, 2022-04, Vol.16 (4), p.1176-1186
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ArticlesPeer ReviewedFull Text
Indicative bacterial communities and taxa of disease-suppressing and growth-promoting composts and their associations to the rhizoplane
Author / Creator:Mayerhofer, Johanna ; Thuerig, Barbara ; Oberhaensli, Thomas ; Enderle, Eileen ; Lutz, Stefanie ; Ahrens, Christian H ; Fuchs, Jacques G ; Widmer, Franco
Publisher:Oxford University Press
Journal title:FEMS microbiology ecology, 2021-10, Vol.97 (10)
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Explosive cell lysis as a mechanism for the biogenesis of bacterial membrane vesicles and biofilms

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Long-read based de novo assembly of low-complexity metagenome samples results in finished genomes and reveals insights into strain diversity and an active phage system

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Identification and Functional Characterization of N-Terminally Acetylated Proteins in Drosophila melanogaster

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Genome-wide transcription start site mapping of Bradyrhizobium japonicum grown free-living or in symbiosis – a rich resource to identify new transcripts, proteins and to study gene regulation

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The AHL- and BDSF-Dependent Quorum Sensing Systems Control Specific and Overlapping Sets of Genes in Burkholderia cenocepacia H111

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Genome assembly and annotation of Meloidogyne enterolobii, an emerging parthenogenetic root-knot nematode

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Response of Burkholderia cenocepacia H111 to Micro-Oxia

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The Hemolymph Proteome of Fed and Starved Drosophila Larvae

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Retraction Note: Genome assembly and annotation of Meloidogyne enterolobii, an emerging parthenogenetic root-knot nematode

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A Novel Robust Screening Assay Identifies Pseudomonas Strains as Reliable Antagonists of the Root-Knot Nematode Meloidogyne incognita

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A Mighty Small Heart: The Cardiac Proteome of Adult Drosophila melanogaster

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Protein and gene model inference based on statistical modeling in k-partite graphs

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Competition assays and physiological experiments of soil and phyllosphere yeasts identify Candida subhashii as a novel antagonist of filamentous fungi

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PeptideClassifier for protein inference and targeted quantitative proteomics

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Role of the flagellar hook in the structural development and antibiotic tolerance of Pseudomonas aeruginosa biofilms

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Indicative bacterial communities and taxa of disease-suppressing and growth-promoting composts and their associations to the rhizoplane

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