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Functional annotation, genome organization and phylogeny of the grapevine (Vitis vinifera) terpene synthase gene family based on genome assembly, FLcDNA cloning, and enzyme assays
Author / Creator:Martin, Diane M ; Aubourg, Sébastien ; Schouwey, Marina B ; Daviet, Laurent ; Schalk, Michel ; Toub, Omid ; Lund, Steven T ; Bohlmann, Jörg
Publisher:England: BioMed Central Ltd
Journal title:BMC plant biology, 2010-10, Vol.10 (1), p.226-226, Article 226
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High-quality de novo assembly of the apple genome and methylome dynamics of early fruit development
Author / Creator:Daccord, Nicolas ; Celton, Jean-Marc ; Linsmith, Gareth ; Becker, Claude ; Choisne, Nathalie ; Schijlen, Elio ; van de Geest, Henri ; Bianco, Luca ; Micheletti, Diego ; Velasco, Riccardo ; Di Pierro, Erica Adele ; Gouzy, Jérôme ; Rees, D Jasper G ; Guérif, Philippe ; Muranty, Hélène ; Durel, Charles-Eric ; Laurens, François ; Lespinasse, Yves ; Gaillard, Sylvain ; Aubourg, Sébastien ; Quesneville, Hadi ; Weigel, Detlef ; van de Weg, Eric ; Troggio, Michela ; Bucher, Etienne
Publisher:New York: Nature Publishing Group US
Journal title:Nature genetics, 2017-07, Vol.49 (7), p.1099-1106
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Integrative epigenomic mapping defines four main chromatin states in Arabidopsis
Author / Creator:Roudier, François ; Ahmed, Ikhlak ; Bérard, Caroline ; Sarazin, Alexis ; Mary-Huard, Tristan ; Cortijo, Sandra ; Bouyer, Daniel ; Caillieux, Erwann ; Duvernois-Berthet, Evelyne ; Al-Shikhley, Liza ; Giraut, Laurène ; Després, Barbara ; Drevensek, Stéphanie ; Barneche, Frédy ; Dèrozier, Sandra ; Brunaud, Véronique ; Aubourg, Sébastien ; Schnittger, Arp ; Bowler, Chris ; Martin-Magniette, Marie-Laure ; Robin, Stéphane ; Caboche, Michel ; Colot, Vincent
Publisher:Chichester, UK: John Wiley & Sons, Ltd
Journal title:The EMBO journal, 2011-05, Vol.30 (10), p.1928-1938
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Structural, Functional, and Evolutionary Analysis of the Unusually Large Stilbene Synthase Gene Family in Grapevine
Author / Creator:Parage, Claire ; Tavares, Raquel ; Réty, Stéphane ; Baltenweck-Guyot, Raymonde ; Poutaraud, Anne ; Renault, Lauriane ; Heintz, Dimitri ; Lugan, Raphaël ; Marais, Gabriel A.B. ; Aubourg, Sébastien ; Hugueney, Philippe
Publisher:Rockville, MD: American Society of Plant Biologists
Journal title:Plant physiology (Bethesda), 2012-11, Vol.160 (3), p.1407-1419
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The RNA helicases AtMTR4 and HEN2 target specific subsets of nuclear transcripts for degradation by the nuclear exosome in Arabidopsis thaliana
Author / Creator:Lange, Heike ; Zuber, Hélène ; Sement, François M ; Chicher, Johana ; Kuhn, Lauriane ; Hammann, Philippe ; Brunaud, Véronique ; Bérard, Caroline ; Bouteiller, Nathalie ; Balzergue, Sandrine ; Aubourg, Sébastien ; Martin-Magniette, Marie-Laure ; Vaucheret, Hervé ; Gagliardi, Dominique
Publisher:United States: Public Library of Science
Journal title:PLoS genetics, 2014-08, Vol.10 (8), p.e1004564-e1004564
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An Erwinia amylovora inducible promoter for improvement of apple fire blight resistance
Author / Creator:Gaucher, Matthieu ; Righetti, Laura ; Aubourg, Sébastien ; Dugé de Bernonville, Thomas ; Brisset, Marie-Noëlle ; Chevreau, Elisabeth ; Vergne, Emilie
Publisher:Berlin/Heidelberg: Springer Berlin Heidelberg
Journal title:Plant cell reports, 2022-07, Vol.41 (7), p.1499-1513
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Widespread anti‐sense transcription in apple is correlated with siRNA production and indicates a large potential for transcriptional and/or post‐transcriptional control
Author / Creator:Celton, Jean‐Marc ; Gaillard, Sylvain ; Bruneau, Maryline ; Pelletier, Sandra ; Aubourg, Sébastien ; Martin‐Magniette, Marie‐Laure ; Navarro, Lionel ; Laurens, François ; Renou, Jean‐Pierre
Publisher:England: William Wesley and Son
Journal title:The New phytologist, 2014-07, Vol.203 (1), p.287-299
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Phytocytokine genes newly discovered in Malus domestica and their regulation in response to Erwinia amylovora and acibenzolar‐S‐methyl
Author / Creator:Guillou, Marie‐Charlotte ; Gaucher, Matthieu ; Vergne, Emilie ; Renou, Jean‐Pierre ; Brisset, Marie‐Noëlle ; Aubourg, Sébastien
Publisher:United States: John Wiley & Sons, Inc
Journal title:The plant genome, 2025-03, Vol.18 (1), p.e20540-n/a
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Large scale study of anti-sense regulation by differential network analysis
Author / Creator:Legeay, Marc ; Aubourg, Sébastien ; Renou, Jean-Pierre ; Duval, Béatrice
Publisher:England: BioMed Central
Journal title:BMC systems biology, 2018-11, Vol.12 (Suppl 5), p.95-95, Article 95
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The PROSCOOP10 Gene Encodes Two Extracellular Hydroxylated Peptides and Impacts Flowering Time in Arabidopsis
Author / Creator:Guillou, Marie-Charlotte ; Balliau, Thierry ; Vergne, Emilie ; Canut, Hervé ; Chourré, Josiane ; Herrera-León, Claudia ; Ramos-Martín, Francisco ; Ahmadi-Afzadi, Masoud ; D'Amelio, Nicola ; Ruelland, Eric ; Zivy, Michel ; Renou, Jean-Pierre ; Jamet, Elisabeth ; Aubourg, Sébastien
Publisher:Switzerland: MDPI AG
Journal title:Plants (Basel), 2022-12, Vol.11 (24), p.3554
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Analysis of CATMA transcriptome data identifies hundreds of novel functional genes and improves gene models in the Arabidopsis genome
Author / Creator:Aubourg, Sébastien ; Martin-Magniette, Marie-Laure ; Brunaud, Véronique ; Taconnat, Ludivine ; Bitton, Frédérique ; Balzergue, Sandrine ; Jullien, Pauline E ; Ingouff, Mathieu ; Thareau, Vincent ; Schiex, Thomas ; Lecharny, Alain ; Renou, Jean-Pierre
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2007-11, Vol.8 (1), p.401-401
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Introns in, introns out in plant gene families: a genomic approach of the dynamics of gene structure
Author / Creator:Lecharny, Alain ; Boudet, Nathalie ; Gy, Isabelle ; Aubourg, Sébastien ; Kreis, Martin
Publisher:Netherlands: Springer Nature B.V
Journal title:Journal of structural and functional genomics, 2003, Vol.3 (1-4), p.111-116
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In Arabidopsis thaliana, 1% of the genome codes for a novel protein family unique to plants
Author / Creator:Aubourg, S ; Boudet, N ; Kreis, M ; Lecharny, A
Publisher:Netherlands: Springer Nature B.V
Journal title:Plant molecular biology, 2000-03, Vol.42 (4), p.603-613
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Functional analysis of Arabidopsis immune-related MAPKs uncovers a role for MPK3 as negative regulator of inducible defences
Author / Creator:Frei dit Frey, Nicolas ; Garcia, Ana Victoria ; Bigeard, Jean ; Zaag, Rim ; Bueso, Eduardo ; Garmier, Marie ; Pateyron, Stéphanie ; de Tauzia-Moreau, Marie-Ludivine ; Brunaud, Véronique ; Balzergue, Sandrine ; Colcombet, Jean ; Aubourg, Sébastien ; Martin-Magniette, Marie-Laure ; Hirt, Heribert
Publisher:England: BioMed Central
Journal title:Genome Biology, 2014-01, Vol.15 (6), p.R87-R87
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Molecular Basis of Evolutionary Events That Shaped the Hardness Locus in Diploid and Polyploid Wheat Species (Triticum and Aegilops)
Author / Creator:Chantret, Nathalie ; Salse, Jérôme ; Sabot, François ; Rahman, Sadequr ; Bellec, Arnaud ; Laubin, Bastien ; Dubois, Ivan ; Dossat, Carole ; Sourdille, Pierre ; Joudrier, Philippe ; Gautier, Marie-Françoise ; Cattolico, Laurence ; Beckert, Michel ; Aubourg, Sébastien ; Weissenbach, Jean ; Caboche, Michel ; Bernard, Michel ; Leroy, Philippe ; Chalhoub, Boulos
Publisher:United States: American Society of Plant Biologists
Journal title:The Plant cell, 2005-04, Vol.17 (4), p.1033-1045
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Synthetic data sets for the identification of key ingredients for RNA-seq differential analysis
Author / Creator:Rigaill, Guillem ; Balzergue, Sandrine ; Brunaud, Véronique ; Blondet, Eddy ; Rau, Andrea ; Rogier, Odile ; Caius, José ; Maugis-Rabusseau, Cathy ; Soubigou-Taconnat, Ludivine ; Aubourg, Sébastien ; Lurin, Claire ; Martin-Magniette, Marie-Laure ; Delannoy, Etienne
Publisher:England: Oxford University Press
Journal title:Briefings in bioinformatics, 2018-01, Vol.19 (1), p.65-76
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Subtilase-mediated biogenesis of the expanded family of SERINE RICH ENDOGENOUS PEPTIDES
Author / Creator:Yang, Huanjie ; Kim, Xeniya ; Skłenar, Jan ; Aubourg, Sébastien ; Sancho-Andrés, Gloria ; Stahl, Elia ; Guillou, Marie-Charlotte ; Gigli-Bisceglia, Nora ; Tran Van Canh, Loup ; Bender, Kyle W. ; Stintzi, Annick ; Reymond, Philippe ; Sánchez-Rodríguez, Clara ; Testerink, Christa ; Renou, Jean-Pierre ; Menke, Frank L. H. ; Schaller, Andreas ; Rhodes, Jack ; Zipfel, Cyril
Publisher:London: Nature Publishing Group UK
Journal title:Nature plants, 2023-12, Vol.9 (12), p.2085-2094
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Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins reveals their essential role in organelle biogenesis
Author / Creator:Lurin, C ; Andres, C ; Aubourg, S ; Bellaoui, M ; Bitton, F ; Bruyere, C ; Caboche, M ; Debast, C ; Gualberto, J ; Hoffmann, B
Publisher:England: American Society of Plant Biologists
Journal title:The Plant cell, 2004-08, Vol.16 (8), p.2089-2103
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Unique genes in plants: specificities and conserved features throughout evolution
Author / Creator:Armisén, David ; Lecharny, Alain ; Aubourg, Sébastien
Publisher:England: BioMed Central Ltd
Journal title:BMC evolutionary biology, 2008-10, Vol.8 (1), p.280-280, Article 280
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The SCOOP12 peptide regulates defense response and root elongation in Arabidopsis thaliana
Author / Creator:Gully, Kay ; Pelletier, Sandra ; Guillou, Marie-Charlotte ; Ferrand, Marina ; Aligon, Sophie ; Pokotylo, Igor ; Perrin, Adrien ; Vergne, Emilie ; Fagard, Mathilde ; Ruelland, Eric ; Grappin, Philippe ; Bucher, Etienne ; Renou, Jean-Pierre ; Aubourg, Sébastien
Publisher:UK: Oxford University Press
Journal title:Journal of experimental botany, 2019-02, Vol.70 (4), p.1349-1365
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Showing 1 to 20 of 46 results

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Functional annotation, genome organization and phylogeny of the grapevine (Vitis vinifera) terpene synthase gene family based on genome assembly, FLcDNA cloning, and enzyme assays

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High-quality de novo assembly of the apple genome and methylome dynamics of early fruit development

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Integrative epigenomic mapping defines four main chromatin states in Arabidopsis

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Structural, Functional, and Evolutionary Analysis of the Unusually Large Stilbene Synthase Gene Family in Grapevine

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The RNA helicases AtMTR4 and HEN2 target specific subsets of nuclear transcripts for degradation by the nuclear exosome in Arabidopsis thaliana

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An Erwinia amylovora inducible promoter for improvement of apple fire blight resistance

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Widespread anti‐sense transcription in apple is correlated with siRNA production and indicates a large potential for transcriptional and/or post‐transcriptional control

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Phytocytokine genes newly discovered in Malus domestica and their regulation in response to Erwinia amylovora and acibenzolar‐S‐methyl

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Large scale study of anti-sense regulation by differential network analysis

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The PROSCOOP10 Gene Encodes Two Extracellular Hydroxylated Peptides and Impacts Flowering Time in Arabidopsis

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Analysis of CATMA transcriptome data identifies hundreds of novel functional genes and improves gene models in the Arabidopsis genome

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Introns in, introns out in plant gene families: a genomic approach of the dynamics of gene structure

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In Arabidopsis thaliana, 1% of the genome codes for a novel protein family unique to plants

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Functional analysis of Arabidopsis immune-related MAPKs uncovers a role for MPK3 as negative regulator of inducible defences

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Molecular Basis of Evolutionary Events That Shaped the Hardness Locus in Diploid and Polyploid Wheat Species (Triticum and Aegilops)

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Synthetic data sets for the identification of key ingredients for RNA-seq differential analysis

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Subtilase-mediated biogenesis of the expanded family of SERINE RICH ENDOGENOUS PEPTIDES

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Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins reveals their essential role in organelle biogenesis

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Unique genes in plants: specificities and conserved features throughout evolution

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The SCOOP12 peptide regulates defense response and root elongation in Arabidopsis thaliana

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