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ArticlesPeer ReviewedFull Text
Viral Metagenomics on Blood-Feeding Arthropods as a Tool for Human Disease Surveillance
Author / Creator:Brinkmann, Annika ; Nitsche, Andreas ; Kohl, Claudia
Publisher:Switzerland: MDPI AG
Journal title:International journal of molecular sciences, 2016-10, Vol.17 (10), p.1743-1743
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The virome of German bats: comparing virus discovery approaches
Author / Creator:Kohl, Claudia ; Brinkmann, Annika ; Radonić, Aleksandar ; Dabrowski, Piotr Wojtek ; Mühldorfer, Kristin ; Nitsche, Andreas ; Wibbelt, Gudrun ; Kurth, Andreas
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2021-04, Vol.11 (1), p.7430-7430, Article 7430
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First detection of bat-borne Issyk-Kul virus in Europe
Author / Creator:Brinkmann, Annika ; Kohl, Claudia ; Radonić, Aleksandar ; Dabrowski, Piotr Wojtek ; Mühldorfer, Kristin ; Nitsche, Andreas ; Wibbelt, Gudrun ; Kurth, Andreas
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2020-12, Vol.10 (1), p.22384-22384, Article 22384
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Strengthening the United Nations Secretary-General’s Mechanism to an alleged use of bioweapons through a quality-assured laboratory response
Author / Creator:Appelt, Sandra ; Rohleder, Anna-Maria ; Invernizzi, Cédric ; Mikulak, Robert ; Brinkmann, Annika ; Nitsche, Andreas ; Krüger, Maren ; Dorner, Martin B. ; Dorner, Brigitte G. ; Scholz, Holger C. ; Grunow, Roland
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2021-05, Vol.12 (1), p.3078-3078, Article 3078
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Protocol for metagenomic virus detection in clinical specimens
Author / Creator:Kohl, Claudia ; Brinkmann, Annika ; Dabrowski, Piotr W ; Radonić, Aleksandar ; Nitsche, Andreas ; Kurth, Andreas
Publisher:United States: U.S. National Center for Infectious Diseases
Journal title:Emerging infectious diseases, 2015-01, Vol.21 (1), p.48-57
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ArticlesPeer ReviewedFull Text
Zwiesel bat banyangvirus, a potentially zoonotic Huaiyangshan banyangvirus (Formerly known as SFTS)–like banyangvirus in Northern bats from Germany
Author / Creator:Kohl, Claudia ; Brinkmann, Annika ; Radonić, Aleksandar ; Dabrowski, Piotr Wojtek ; Nitsche, Andreas ; Mühldorfer, Kristin ; Wibbelt, Gudrun ; Kurth, Andreas
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2020-01, Vol.10 (1), p.1370-1370, Article 1370
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Reemergence of Clade IIb–Associated Mpox, Germany, July–December 2023
Author / Creator:Obermeier, Patrick E. ; Plinke, Clarissa F. ; Brinkmann, Annika ; Lachmann, Raskit ; Melchert, Julia ; Corman, Victor M. ; Nitsche, Andreas ; Marcus, Ulrich ; Schmidt, Axel J. ; Jansen, Klaus ; Buder, Susanne C.
Publisher:United States: Centers for Disease Control and Prevention
Journal title:Emerging infectious diseases, 2024-07, Vol.30 (7), p.1416-1419
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Resource-efficient internally controlled in-house real-time PCR detection of SARS-CoV-2
Author / Creator:Michel, Janine ; Neumann, Markus ; Krause, Eva ; Rinner, Thomas ; Muzeniek, Therese ; Grossegesse, Marica ; Hille, Georg ; Schwarz, Franziska ; Puyskens, Andreas ; Förster, Sophie ; Biere, Barbara ; Bourquain, Daniel ; Domingo, Cristina ; Brinkmann, Annika ; Schaade, Lars ; Schrick, Livia ; Nitsche, Andreas
Publisher:England: BioMed Central Ltd
Journal title:Virology journal, 2021-06, Vol.18 (1), p.110-11, Article 110
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Genomic Sequencing and Phylogenomics of Cowpox Virus
Author / Creator:Diaz-Cánova, Diana ; Mavian, Carla ; Brinkmann, Annika ; Nitsche, Andreas ; Moens, Ugo ; Okeke, Malachy Ifeanyi
Publisher:Basel: MDPI AG
Journal title:Viruses, 2022-09, Vol.14 (10), p.2134
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Re-assembly of nineteenth-century smallpox vaccine genomes reveals the contemporaneous use of horsepox and horsepox-related viruses in the USA
Author / Creator:Brinkmann, Annika ; Souza, Aline R. V. ; Esparza, José ; Nitsche, Andreas ; Damaso, Clarissa R.
Publisher:England: BioMed Central Ltd
Journal title:Genome Biology, 2020-12, Vol.21 (1), p.286-286, Article 286
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Arboviral screening of invasive Aedes species in northeastern Turkey: West Nile virus circulation and detection of insect-only viruses
Author / Creator:Akıner, Mustafa M. ; Öztürk, Murat ; Başer, Aykut Buğra ; Günay, Filiz ; Hacıoğlu, Sabri ; Brinkmann, Annika ; Emanet, Nergis ; Alten, Bülent ; Özkul, Aykut ; Nitsche, Andreas ; Linton, Yvonne-Marie ; Ergünay, Koray
Publisher:United States: Public Library of Science
Journal title:PLoS neglected tropical diseases, 2019-05, Vol.13 (5), p.e0007334
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Analysis of two choir outbreaks acting in concert to characterize long- range transmission risks through SARS-CoV-2, Berlin, Germany, 2020
Author / Creator:Reichert, Felix ; Stier, Oliver ; Hartmann, Anne ; Ruscher, Claudia ; Brinkmann, Annika ; Grossegesse, Marica ; Neumann, Markus ; Werber, Dirk ; Hausner, Marius ; Kunze, Mareike ; Weiß, Bettina ; Michel, Janine ; Nitsche, Andreas ; an der Heiden, Matthias ; Kriegel, Martin ; Corman, Victor Max ; Jones, Terry Carleton ; Drosten, Christian ; Brommann, Tobias ; Buchholz, Udo
Publisher:United States: Public Library of Science
Journal title:PloS one, 2022-11, Vol.17 (11), p.e0277699-e0277699
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ArticlesPeer ReviewedFull Text
RespiCoV: Simultaneous identification of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) and 46 respiratory tract viruses and bacteria by amplicon-based Oxford-Nanopore MinION sequencing
Author / Creator:Brinkmann, Annika ; Uddin, Steven ; Ulm, Sophie-Luisa ; Pape, Katharina ; Förster, Sophie ; Enan, Khalid ; Nourlil, Jalal ; Krause, Eva ; Schaade, Lars ; Michel, Janine ; Nitsche, Andreas
Publisher:United States: Public Library of Science
Journal title:PloS one, 2022-03, Vol.17 (3), p.e0264855-e0264855
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Development and preliminary evaluation of a multiplexed amplification and next generation sequencing method for viral hemorrhagic fever diagnostics
Author / Creator:Brinkmann, Annika ; Ergünay, Koray ; Radonić, Aleksandar ; Kocak Tufan, Zeliha ; Domingo, Cristina ; Nitsche, Andreas
Publisher:United States: Public Library of Science
Journal title:PLoS neglected tropical diseases, 2017-11, Vol.11 (11), p.e0006075-e0006075
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Survey and Characterization of Jingmen Tick Virus Variants
Author / Creator:Dinçer, Ender ; Hacıoğlu, Sabri ; Kar, Sırrı ; Emanet, Nergis ; Brinkmann, Annika ; Nitsche, Andreas ; Özkul, Aykut ; Linton, Yvonne-Marie ; Ergünay, Koray
Publisher:Switzerland: MDPI AG
Journal title:Viruses, 2019-11, Vol.11 (11), p.1071
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A cross-sectional screening by next-generation sequencing reveals Rickettsia, Coxiella, Francisella, Borrelia, Babesia, Theileria and Hemolivia species in ticks from Anatolia
Author / Creator:Brinkmann, Annika ; Hekimoğlu, Olcay ; Dinçer, Ender ; Hagedorn, Peter ; Nitsche, Andreas ; Ergünay, Koray
Publisher:England: BioMed Central Ltd
Journal title:Parasites & vectors, 2019-01, Vol.12 (1), p.26-26, Article 26
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Isolation and Characterization of Three Mammalian Orthoreoviruses from European Bats
Author / Creator:Kohl, Claudia ; Lesnik, René ; Brinkmann, Annika ; Ebinger, Arnt ; Radonić, Aleksandar ; Nitsche, Andreas ; Mühldorfer, Kristin ; Wibbelt, Gudrun ; Kurth, Andreas
Publisher:United States: Public Library of Science
Journal title:PloS one, 2012-08, Vol.7 (8), p.e43106-e43106
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Utility of a Sequence-Independent, Single-Primer-Amplification (SISPA) and Nanopore Sequencing Approach for Detection and Characterization of Tick-Borne Viral Pathogens
Author / Creator:Brinkmann, Annika ; Uddin, Steven ; Krause, Eva ; Surtees, Rebecca ; Dinçer, Ender ; Kar, Sırrı ; Hacıoğlu, Sabri ; Özkul, Aykut ; Ergünay, Koray ; Nitsche, Andreas
Publisher:Switzerland: MDPI AG
Journal title:Viruses, 2021-01, Vol.13 (2), p.203
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Generic amplification and next generation sequencing reveal Crimean-Congo hemorrhagic fever virus AP92-like strain and distinct tick phleboviruses in Anatolia, Turkey
Author / Creator:Dinçer, Ender ; Brinkmann, Annika ; Hekimoğlu, Olcay ; Hacıoğlu, Sabri ; Földes, Katalin ; Karapınar, Zeynep ; Polat, Pelin Fatoş ; Oğuz, Bekir ; Orunç Kılınç, Özlem ; Hagedorn, Peter ; Özer, Nurdan ; Özkul, Aykut ; Nitsche, Andreas ; Ergünay, Koray
Publisher:England: BioMed Central Ltd
Journal title:Parasites & vectors, 2017-07, Vol.10 (1), p.335-335, Article 335
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Novel Tick Phlebovirus Genotypes Lacking Evidence for Vertebrate Infections in Anatolia and Thrace, Turkey
Author / Creator:Emanet, Nergis ; Kar, Sırrı ; Dinçer, Ender ; Brinkmann, Annika ; Hacıoğlu, Sabri ; Farzani, Touraj Aligholipour ; Koçak Tufan, Zeliha ; Polat, Pelin Fatoş ; Şahan, Adem ; Özkul, Aykut ; Nitsche, Andreas ; Linton, Yvonne-Marie ; Ergünay, Koray
Publisher:Switzerland: MDPI AG
Journal title:Viruses, 2019-08, Vol.11 (8), p.703
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Viral Metagenomics on Blood-Feeding Arthropods as a Tool for Human Disease Surveillance

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The virome of German bats: comparing virus discovery approaches

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First detection of bat-borne Issyk-Kul virus in Europe

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Strengthening the United Nations Secretary-General’s Mechanism to an alleged use of bioweapons through a quality-assured laboratory response

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Protocol for metagenomic virus detection in clinical specimens

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Zwiesel bat banyangvirus, a potentially zoonotic Huaiyangshan banyangvirus (Formerly known as SFTS)–like banyangvirus in Northern bats from Germany

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Reemergence of Clade IIb–Associated Mpox, Germany, July–December 2023

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Resource-efficient internally controlled in-house real-time PCR detection of SARS-CoV-2

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Genomic Sequencing and Phylogenomics of Cowpox Virus

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Re-assembly of nineteenth-century smallpox vaccine genomes reveals the contemporaneous use of horsepox and horsepox-related viruses in the USA

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Arboviral screening of invasive Aedes species in northeastern Turkey: West Nile virus circulation and detection of insect-only viruses

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Analysis of two choir outbreaks acting in concert to characterize long- range transmission risks through SARS-CoV-2, Berlin, Germany, 2020

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RespiCoV: Simultaneous identification of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) and 46 respiratory tract viruses and bacteria by amplicon-based Oxford-Nanopore MinION sequencing

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Development and preliminary evaluation of a multiplexed amplification and next generation sequencing method for viral hemorrhagic fever diagnostics

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Survey and Characterization of Jingmen Tick Virus Variants

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A cross-sectional screening by next-generation sequencing reveals Rickettsia, Coxiella, Francisella, Borrelia, Babesia, Theileria and Hemolivia species in ticks from Anatolia

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Isolation and Characterization of Three Mammalian Orthoreoviruses from European Bats

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Utility of a Sequence-Independent, Single-Primer-Amplification (SISPA) and Nanopore Sequencing Approach for Detection and Characterization of Tick-Borne Viral Pathogens

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Generic amplification and next generation sequencing reveal Crimean-Congo hemorrhagic fever virus AP92-like strain and distinct tick phleboviruses in Anatolia, Turkey

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Novel Tick Phlebovirus Genotypes Lacking Evidence for Vertebrate Infections in Anatolia and Thrace, Turkey

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