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Catchen, Julian M
Journal title:American Men & Women of Science : A Biographical Directory of Today’s Leaders in Physical, Biological and Related Sciences: BUR-CON, 2022, p.1793-1793
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Catchen, Julian M
Journal title:American Men & Women of Science : A Biographical Directory of Today’s Leaders in Physical, Biological and Related Sciences: BUP-CON, 2021, p.1784-1784
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ArticlesPeer ReviewedFull Text
Stacks: Building and Genotyping Loci De Novo From Short-Read Sequences
Author / Creator:Catchen, Julian M ; Amores, Angel ; Hohenlohe, Paul ; Cresko, William ; Postlethwait, John H
Publisher:Oxford: Oxford University Press
Journal title:G3 : genes - genomes - genetics, 2011-08, Vol.1 (3), p.171-182
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ArticlesPeer ReviewedFull Text
Resolving postglacial phylogeography using high-throughput sequencing
Author / Creator:Emerson, Kevin J. ; Merz, Clayton R. ; Catchen, Julian M. ; Hohenlohe, Paul A. ; Cresko, William A. ; Bradshaw, William E. ; Holzapfel, Christina M.
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2010-09, Vol.107 (37), p.16196-16200
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ArticlesPeer ReviewedFull Text
Male and female contributions to behavioral isolation in darters as a function of genetic distance and color distance
Author / Creator:Moran, Rachel L. ; Zhou, Muchu ; Catchen, Julian M. ; Fuller, Rebecca C.
Publisher:United States: Wiley
Journal title:Evolution, 2017-10, Vol.71 (10), p.2428-2444
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ArticlesPeer ReviewedFull Text
Retinoic Acid Metabolic Genes, Meiosis, and Gonadal Sex Differentiation in Zebrafish
Author / Creator:Rodríguez-Marí, Adriana ; Cañestro, Cristian ; BreMiller, Ruth A. ; Catchen, Julian M. ; Yan, Yi-Lin ; Postlethwait, John H.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2013-09, Vol.8 (9), p.e73951-e73951
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The genomic basis of the plant island syndrome in Darwin’s giant daisies
Author / Creator:Cerca, José ; Petersen, Bent ; Lazaro-Guevara, José Miguel ; Rivera-Colón, Angel ; Birkeland, Siri ; Vizueta, Joel ; Li, Siyu ; Li, Qionghou ; Loureiro, João ; Kosawang, Chatchai ; Díaz, Patricia Jaramillo ; Rivas-Torres, Gonzalo ; Fernández-Mazuecos, Mario ; Vargas, Pablo ; McCauley, Ross A. ; Petersen, Gitte ; Santos-Bay, Luisa ; Wales, Nathan ; Catchen, Julian M. ; Machado, Daniel ; Nowak, Michael D. ; Suh, Alexander ; Sinha, Neelima R. ; Nielsen, Lene R. ; Seberg, Ole ; Gilbert, M. Thomas P. ; Leebens-Mack, James H. ; Rieseberg, Loren H. ; Martin, Michael D.
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2022-06, Vol.13 (1), p.3729-3729, Article 3729
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ArticlesPeer ReviewedFull Text
Deriving genotypes from RAD-seq short-read data using Stacks
Author / Creator:Rochette, Nicolas C ; Catchen, Julian M
Publisher:London: Nature Publishing Group UK
Journal title:Nature protocols, 2017-12, Vol.12 (12), p.2640-2659
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Evolution of a New Function by Degenerative Mutation in Cephalochordate Steroid Receptors
Author / Creator:Bridgham, Jamie T. ; Brown, Justine E. ; Rodríguez-Marí, Adriana ; Catchen, Julian M. ; Thornton, Joseph W.
Publisher:United States: Public Library of Science
Journal title:PLoS genetics, 2008-09, Vol.4 (9), p.e1000191-e1000191
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ArticlesPeer ReviewedFull Text
Antarctic blackfin icefish genome reveals adaptations to extreme environments
Author / Creator:Kim, Bo-Mi ; Amores, Angel ; Kang, Seunghyun ; Ahn, Do-Hwan ; Kim, Jin-Hyoung ; Kim, Il-Chan ; Lee, Jun Hyuck ; Lee, Sung Gu ; Lee, Hyoungseok ; Lee, Jungeun ; Kim, Han-Woo ; Desvignes, Thomas ; Batzel, Peter ; Sydes, Jason ; Titus, Tom ; Wilson, Catherine A. ; Catchen, Julian M. ; Warren, Wesley C. ; Schartl, Manfred ; Detrich, H. William ; Postlethwait, John H. ; Park, Hyun
Publisher:London: Nature Publishing Group UK
Journal title:Nature ecology & evolution, 2019-03, Vol.3 (3), p.469-478
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ArticlesPeer ReviewedFull Text
Incomplete lineage sorting and ancient admixture, and speciation without morphological change in ghost-worm cryptic species
Author / Creator:Cerca, José ; Rivera-Colón, Angel G. ; Ferreira, Mafalda S. ; Ravinet, Mark ; Nowak, Michael D. ; Catchen, Julian M. ; Struck, Torsten H.
Publisher:United States: PeerJ. Ltd
Journal title:PeerJ (San Francisco, CA), 2021-02, Vol.9, p.e10896, Article e10896
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ArticlesPeer ReviewedFull Text
Comparative Oncogenomic Analysis of Copy Number Alterations in Human and Zebrafish Tumors Enables Cancer Driver Discovery
Author / Creator:Zhang, GuangJun ; Hoersch, Sebastian ; Amsterdam, Adam ; Whittaker, Charles A. ; Beert, Eline ; Catchen, Julian M. ; Farrington, Sarah ; Postlethwait, John H. ; Legius, Eric ; Hopkins, Nancy ; Lees, Jacqueline A.
Publisher:United States: Public Library of Science
Journal title:PLoS genetics, 2013-08, Vol.9 (8), p.e1003734-e1003734
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ArticlesPeer ReviewedFull Text
Consequences of Lineage-Specific Gene Loss on Functional Evolution of Surviving Paralogs: ALDH1A and Retinoic Acid Signaling in Vertebrate Genomes
Author / Creator:Cañestro, Cristian ; Catchen, Julian M. ; Rodríguez-Marí, Adriana ; Yokoi, Hayato ; Postlethwait, John H.
Publisher:United States: Public Library of Science
Journal title:PLoS genetics, 2009-05, Vol.5 (5), p.e1000496
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ArticlesPeer ReviewedFull Text
Replicate Phylogenies and Post-Glacial Range Expansion of the Pitcher-Plant Mosquito, Wyeomyia smithii, in North America
Author / Creator:Merz, Clayton ; Catchen, Julian M. ; Hanson-Smith, Victor ; Emerson, Kevin J. ; Bradshaw, William E. ; Holzapfel, Christina M.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2013-09, Vol.8 (9), p.e72262-e72262
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ArticlesPeer ReviewedFull Text
Genome-wide genetic marker discovery and genotyping using next-generation sequencing
Author / Creator:Davey, John W. ; Hohenlohe, Paul A. ; Etter, Paul D. ; Boone, Jason Q. ; Catchen, Julian M. ; Blaxter, Mark L.
Publisher:London: Nature Publishing Group UK
Journal title:Nature reviews. Genetics, 2011-07, Vol.12 (7), p.499-510
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ArticlesPeer ReviewedFull Text
Genomic Resources for Darters (Percidae: Etheostominae) Provide Insight into Postzygotic Barriers Implicated in Speciation
Author / Creator:Moran, Rachel L ; Catchen, Julian M ; Fuller, Rebecca C
Publisher:Oxford: Oxford University Press
Journal title:Molecular biology and evolution, 2020-03, Vol.37 (3), p.711-729
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ArticlesPeer ReviewedFull Text
Evaluating Illumina-, Nanopore-, and PacBio-based genome assembly strategies with the bald notothen, Trematomus borchgrevinki
Author / Creator:Rayamajhi, Niraj ; Cheng, Chi-Hing Christina ; Catchen, Julian M
Publisher:England: Oxford University Press
Journal title:G3 : genes - genomes - genetics, 2022-11, Vol.12 (11)
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ArticlesPeer ReviewedFull Text
Genomics of Secondarily Temperate Adaptation in the Only Non-Antarctic Icefish
Author / Creator:Rivera-Colón, Angel G ; Rayamajhi, Niraj ; Minhas, Bushra Fazal ; Madrigal, Giovanni ; Bilyk, Kevin T ; Yoon, Veronica ; Hüne, Mathias ; Gregory, Susan ; Cheng, C H Christina ; Catchen, Julian M
Publisher:US: Oxford University Press
Journal title:Molecular biology and evolution, 2023-03, Vol.40 (3)
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ArticlesPeer ReviewedFull Text
Evaluating the genome-wide impacts of species translocations: the greater prairie-chicken as a case study
Author / Creator:Capel, Samantha L. R. ; Bouzat, Juan L. ; Catchen, Julian M. ; Johnson, Jeff A. ; Dunn, Peter O. ; Paige, Ken N.
Publisher:Dordrecht: Springer Netherlands
Journal title:Conservation genetics, 2022-02, Vol.23 (1), p.179-191
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ArticlesPeer ReviewedFull Text
Selection, Linkage, and Population Structure Interact To Shape Genetic Variation Among Threespine Stickleback Genomes
Author / Creator:Nelson, Thomas C ; Crandall, Johnathan G ; Ituarte, Catherine M ; Catchen, Julian M ; Cresko, William A
Publisher:United States: Genetics Society of America
Journal title:Genetics (Austin), 2019-08, Vol.212 (4), p.1367-1382
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Catchen, Julian M

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Catchen, Julian M

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Stacks: Building and Genotyping Loci De Novo From Short-Read Sequences

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Resolving postglacial phylogeography using high-throughput sequencing

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Male and female contributions to behavioral isolation in darters as a function of genetic distance and color distance

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Retinoic Acid Metabolic Genes, Meiosis, and Gonadal Sex Differentiation in Zebrafish

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The genomic basis of the plant island syndrome in Darwin’s giant daisies

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Deriving genotypes from RAD-seq short-read data using Stacks

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Evolution of a New Function by Degenerative Mutation in Cephalochordate Steroid Receptors

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Antarctic blackfin icefish genome reveals adaptations to extreme environments

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Incomplete lineage sorting and ancient admixture, and speciation without morphological change in ghost-worm cryptic species

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Comparative Oncogenomic Analysis of Copy Number Alterations in Human and Zebrafish Tumors Enables Cancer Driver Discovery

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Consequences of Lineage-Specific Gene Loss on Functional Evolution of Surviving Paralogs: ALDH1A and Retinoic Acid Signaling in Vertebrate Genomes

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Replicate Phylogenies and Post-Glacial Range Expansion of the Pitcher-Plant Mosquito, Wyeomyia smithii, in North America

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Genome-wide genetic marker discovery and genotyping using next-generation sequencing

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Genomic Resources for Darters (Percidae: Etheostominae) Provide Insight into Postzygotic Barriers Implicated in Speciation

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Evaluating Illumina-, Nanopore-, and PacBio-based genome assembly strategies with the bald notothen, Trematomus borchgrevinki

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Genomics of Secondarily Temperate Adaptation in the Only Non-Antarctic Icefish

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Evaluating the genome-wide impacts of species translocations: the greater prairie-chicken as a case study

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Selection, Linkage, and Population Structure Interact To Shape Genetic Variation Among Threespine Stickleback Genomes

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