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ArticlesPeer ReviewedFull Text
DeepProg: an ensemble of deep-learning and machine-learning models for prognosis prediction using multi-omics data
Author / Creator:Poirion, Olivier B. ; Jing, Zheng ; Chaudhary, Kumardeep ; Huang, Sijia ; Garmire, Lana X.
Publisher:England: BioMed Central Ltd
Journal title:Genome medicine, 2021-07, Vol.13 (1), p.112-112, Article 112
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In Silico Approach for Predicting Toxicity of Peptides and Proteins
Author / Creator:Gupta, Sudheer ; Kapoor, Pallavi ; Chaudhary, Kumardeep ; Gautam, Ankur ; Kumar, Rahul ; Raghava, Gajendra P. S.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2013-09, Vol.8 (9), p.e73957
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In silico approaches for designing highly effective cell penetrating peptides
Author / Creator:Gautam, Ankur ; Chaudhary, Kumardeep ; Kumar, Rahul ; Sharma, Arun ; Kapoor, Pallavi ; Tyagi, Atul ; Raghava, Gajendra P S
Publisher:England: BioMed Central Ltd
Journal title:Journal of translational medicine, 2013-03, Vol.11 (1), p.74-74, Article 74
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Gene expression-based biomarkers for discriminating early and late stage of clear cell renal cancer
Author / Creator:Bhalla, Sherry ; Chaudhary, Kumardeep ; Kumar, Ritesh ; Sehgal, Manika ; Kaur, Harpreet ; Sharma, Suresh ; Raghava, Gajendra P. S.
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2017-03, Vol.7 (1), p.44997-44997, Article 44997
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Computer-aided prediction of antigen presenting cell modulators for designing peptide-based vaccine adjuvants
Author / Creator:Nagpal, Gandharva ; Chaudhary, Kumardeep ; Agrawal, Piyush ; Raghava, Gajendra P. S.
Publisher:England: BioMed Central Ltd
Journal title:Journal of translational medicine, 2018-07, Vol.16 (1), p.181-181, Article 181
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PEPstrMOD: structure prediction of peptides containing natural, non-natural and modified residues
Author / Creator:Singh, Sandeep ; Singh, Harinder ; Tuknait, Abhishek ; Chaudhary, Kumardeep ; Singh, Balvinder ; Kumaran, S. ; Raghava, Gajendra P. S.
Publisher:England: BioMed Central
Journal title:Biology direct, 2015-12, Vol.10 (1), p.73-73, Article 73
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High failure rate of ChAdOx1-nCoV19 immunization against asymptomatic infection in healthcare workers during a Delta variant surge
Author / Creator:Ujjainiya, Rajat ; Tyagi, Akansha ; Sardana, Viren ; Naushin, Salwa ; Bhatheja, Nitin ; Kumar, Kartik ; Barman, Joydeb ; Prakash, Satyartha ; Kutum, Rintu ; Bhaskar, Akash Kumar ; Singh, Prateek ; Chaudhary, Kumardeep ; Loomba, Menka ; Khanna, Yukti ; Walecha, Chestha ; Ahmed, Rizwan ; Yadav, Ashutosh ; Bajaj, Archana ; Malik, Gaurav ; Qureshi, Sahar ; Waghdhare, Swati ; Siddiqui, Samreen ; Trehan, Kamal Krishan ; Mani, Manju ; Dang, Rajiv ; Das, Poonam ; Dougall, Pankaj ; Mahajan, Monica ; Sonar, Sudipta ; Jakhar, Kamini ; Kumar, Reema ; Tiwari, Mahima ; Mani, Shailendra ; Bhattacharyya, Sankar ; Budhiraja, Sandeep ; Agrawal, Anurag ; Dash, Debasis ; Jha, Sujeet ; Sengupta, Shantanu
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2022-04, Vol.13 (1), p.1726-1726, Article 1726
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TumorHoPe: A Database of Tumor Homing Peptides
Author / Creator:Kapoor, Pallavi ; Singh, Harinder ; Gautam, Ankur ; Chaudhary, Kumardeep ; Kumar, Rahul ; Raghava, Gajendra P. S.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2012-04, Vol.7 (4), p.e35187-e35187
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Exome-wide evaluation of rare coding variants using electronic health records identifies new gene–phenotype associations
Author / Creator:Park, Joseph ; Lucas, Anastasia M. ; Zhang, Xinyuan ; Chaudhary, Kumardeep ; Cho, Judy H. ; Nadkarni, Girish ; Dobbyn, Amanda ; Chittoor, Geetha ; Josyula, Navya S. ; Katz, Nathan ; Breeyear, Joseph H. ; Ahmadmehrabi, Shadi ; Drivas, Theodore G. ; Chavali, Venkata R. M. ; Fasolino, Maria ; Sawada, Hisashi ; Daugherty, Alan ; Li, Yanming ; Zhang, Chen ; Bradford, Yuki ; Weaver, JoEllen ; Verma, Anurag ; Judy, Renae L. ; Kember, Rachel L. ; Overton, John D. ; Reid, Jeffrey G. ; Ferreira, Manuel A. R. ; Li, Alexander H. ; Baras, Aris ; LeMaire, Scott A. ; Shen, Ying H. ; Naji, Ali ; Kaestner, Klaus H. ; Vahedi, Golnaz ; Edwards, Todd L. ; Chen, Jinbo ; Damrauer, Scott M. ; Justice, Anne E. ; Do, Ron ; Ritchie, Marylyn D. ; Rader, Daniel J.
Publisher:New York: Nature Publishing Group US
Journal title:Nature medicine, 2021-01, Vol.27 (1), p.66-72
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Prediction of anticancer molecules using hybrid model developed on molecules screened against NCI-60 cancer cell lines
Author / Creator:Singh, Harinder ; Kumar, Rahul ; Singh, Sandeep ; Chaudhary, Kumardeep ; Gautam, Ankur ; Raghava, Gajendra P. S.
Publisher:England: BioMed Central
Journal title:BMC cancer, 2016-02, Vol.16 (1), p.77-77, Article 77
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Neutralizing antibody responses to SARS-CoV-2 Omicron variants: Post six months following two-dose & three-dose vaccination of ChAdOx1 nCoV-19 or BBV152
Author / Creator:Yadav, Pragya D. ; Sardana, Viren ; Deshpande, Gururaj Rao ; Shinde, Pradnya V. ; Thangaraj, Jeromie Wesley Vivian ; George, Leyanna S. ; Sapkal, Gajanan N. ; Patil, Deepak Y. ; Sahay, Rima R. ; Shete, Anita M. ; Joshi, Madhavi ; Murhekar, Manoj ; Godbole, Sheela ; Gupta, Nivedita ; Prakash, Satyartha ; Rathore, Mamta ; Ujjainiya, Rajat ; Singh, Ajay Pratap ; Mishra, Aastha ; Dash, Debasis ; Chaudhary, Kumardeep ; Sengupta, Shantanu
Publisher:India: Wolters Kluwer - Medknow
Journal title:Indian Journal of Medical Research, 2024-02, Vol.159 (2), p.223-231
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Association of SARS-CoV-2 viral load at admission with in-hospital acute kidney injury: A retrospective cohort study
Author / Creator:Paranjpe, Ishan ; Chaudhary, Kumardeep ; Johnson, Kipp W. ; Jaladanki, Suraj K. ; Zhao, Shan ; De Freitas, Jessica K. ; Pujdas, Elisabet ; Chaudhry, Fayzan ; Bottinger, Erwin P. ; Levin, Matthew A. ; Fayad, Zahi A. ; Charney, Alexander W. ; Houldsworth, Jane ; Cordon-Cardo, Carlos ; Glicksberg, Benjamin S. ; Nadkarni, Girish N.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2021-02, Vol.16 (2), p.e0247366-e0247366
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A Platform for Designing Genome-Based Personalized Immunotherapy or Vaccine against Cancer
Author / Creator:Gupta, Sudheer ; Chaudhary, Kumardeep ; Dhanda, Sandeep Kumar ; Kumar, Rahul ; Kumar, Shailesh ; Sehgal, Manika ; Nagpal, Gandharva ; Raghava, Gajendra P. S.
Publisher:United States: Public Library of Science
Journal title:PloS one, 2016-11, Vol.11 (11), p.e0166372-e0166372
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In Silico Models for Designing and Discovering Novel Anticancer Peptides
Author / Creator:Tyagi, Atul ; Kapoor, Pallavi ; Kumar, Rahul ; Chaudhary, Kumardeep ; Gautam, Ankur ; Raghava, G. P. S.
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2013-10, Vol.3 (1), p.2984-2984, Article 2984
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A Web Server and Mobile App for Computing Hemolytic Potency of Peptides
Author / Creator:Chaudhary, Kumardeep ; Kumar, Ritesh ; Singh, Sandeep ; Tuknait, Abhishek ; Gautam, Ankur ; Mathur, Deepika ; Anand, Priya ; Varshney, Grish C. ; Raghava, Gajendra P. S.
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2016-03, Vol.6 (1), p.22843-22843, Article 22843
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Comprehensive Report 12th Cardiovascular Research Convergence 2023 Bench to Bedside Jointly Organized by AIIMS, New Delhi and CSIR-IGIB, New Delhi
Author / Creator:Chaudhary, Kumardeep ; Mishra, Aastha ; Rathore, Mamta
Publisher:India: Wolters Kluwer - Medknow
Journal title:Journal of the practice of cardiovascular sciences, 2023-09, Vol.9 (3), p.235-236
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An in silico platform for predicting, screening and designing of antihypertensive peptides
Author / Creator:Kumar, Ravi ; Chaudhary, Kumardeep ; Singh Chauhan, Jagat ; Nagpal, Gandharva ; Kumar, Rahul ; Sharma, Minakshi ; Raghava, Gajendra P.S.
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2015-07, Vol.5 (1), p.12512-12512, Article 12512
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Prediction of Incident Heart Failure in TTR Val122Ile Carriers One Year Ahead of Diagnosis in a Multiethnic Biobank
Author / Creator:Chaudhary, Kumardeep ; Petrazzini, Ben O. ; Narula, Jagat ; Nadkarni, Girish N. ; Do, Ron
Publisher:United States: Elsevier Inc
Journal title:The American journal of cardiology, 2021-03, Vol.142, p.151-153
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CancerDR: Cancer Drug Resistance Database
Author / Creator:Kumar, Rahul ; Chaudhary, Kumardeep ; Gupta, Sudheer ; Singh, Harinder ; Kumar, Shailesh ; Gautam, Ankur ; Kapoor, Pallavi ; Raghava, Gajendra P. S.
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2013-03, Vol.3 (1), p.1445-1445, Article 1445
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Prioritization of anticancer drugs against a cancer using genomic features of cancer cells: A step towards personalized medicine
Author / Creator:Gupta, Sudheer ; Chaudhary, Kumardeep ; Kumar, Rahul ; Gautam, Ankur ; Nanda, Jagpreet Singh ; Dhanda, Sandeep Kumar ; Brahmachari, Samir Kumar ; Raghava, Gajendra P. S.
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2016-03, Vol.6 (1), p.23857-23857, Article 23857
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Showing 1 to 20 of 39 results

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DeepProg: an ensemble of deep-learning and machine-learning models for prognosis prediction using multi-omics data

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In Silico Approach for Predicting Toxicity of Peptides and Proteins

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In silico approaches for designing highly effective cell penetrating peptides

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Gene expression-based biomarkers for discriminating early and late stage of clear cell renal cancer

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Computer-aided prediction of antigen presenting cell modulators for designing peptide-based vaccine adjuvants

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PEPstrMOD: structure prediction of peptides containing natural, non-natural and modified residues

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High failure rate of ChAdOx1-nCoV19 immunization against asymptomatic infection in healthcare workers during a Delta variant surge

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TumorHoPe: A Database of Tumor Homing Peptides

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Exome-wide evaluation of rare coding variants using electronic health records identifies new gene–phenotype associations

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Prediction of anticancer molecules using hybrid model developed on molecules screened against NCI-60 cancer cell lines

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Neutralizing antibody responses to SARS-CoV-2 Omicron variants: Post six months following two-dose & three-dose vaccination of ChAdOx1 nCoV-19 or BBV152

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Association of SARS-CoV-2 viral load at admission with in-hospital acute kidney injury: A retrospective cohort study

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A Platform for Designing Genome-Based Personalized Immunotherapy or Vaccine against Cancer

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In Silico Models for Designing and Discovering Novel Anticancer Peptides

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A Web Server and Mobile App for Computing Hemolytic Potency of Peptides

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Comprehensive Report 12th Cardiovascular Research Convergence 2023 Bench to Bedside Jointly Organized by AIIMS, New Delhi and CSIR-IGIB, New Delhi

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An in silico platform for predicting, screening and designing of antihypertensive peptides

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Prediction of Incident Heart Failure in TTR Val122Ile Carriers One Year Ahead of Diagnosis in a Multiethnic Biobank

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CancerDR: Cancer Drug Resistance Database

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Prioritization of anticancer drugs against a cancer using genomic features of cancer cells: A step towards personalized medicine

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