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ArticlesPeer ReviewedFull Text
Connecting structure to function with the recovery of over 1000 high-quality metagenome-assembled genomes from activated sludge using long-read sequencing
Author / Creator:Singleton, Caitlin M. ; Petriglieri, Francesca ; Kristensen, Jannie M. ; Kirkegaard, Rasmus H. ; Michaelsen, Thomas Y. ; Andersen, Martin H. ; Kondrotaite, Zivile ; Karst, Søren M. ; Dueholm, Morten S. ; Nielsen, Per H. ; Albertsen, Mads
Publisher:London: Nature Publishing Group UK
Journal title:Nature communications, 2021-03, Vol.12 (1), p.2009-13, Article 2009
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ArticlesPeer ReviewedFull Text
Retrieval of a million high-quality, full-length microbial 16S and 18S rRNA gene sequences without primer bias
Author / Creator:Karst, Søren M ; Dueholm, Morten S ; McIlroy, Simon J ; Kirkegaard, Rasmus H ; Nielsen, Per H ; Albertsen, Mads
Publisher:New York: Nature Publishing Group US
Journal title:Nature biotechnology, 2018-02, Vol.36 (2), p.190-195
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ArticlesPeer ReviewedFull Text
Curli functional amyloid systems are phylogenetically widespread and display large diversity in operon and protein structure
Author / Creator:Dueholm, Morten S ; Albertsen, Mads ; Otzen, Daniel ; Nielsen, Per Halkjær
Publisher:United States: Public Library of Science
Journal title:PloS one, 2012-12, Vol.7 (12), p.e51274-e51274
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ArticlesPeer ReviewedFull Text
Evolutionary insight into the functional amyloids of the pseudomonads
Author / Creator:Dueholm, Morten S ; Otzen, Daniel ; Nielsen, Per Halkjær
Publisher:United States: Public Library of Science
Journal title:PloS one, 2013-10, Vol.8 (10), p.e76630-e76630
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ArticlesPeer ReviewedFull Text
Expression of Fap amyloids in Pseudomonas aeruginosa, P. fluorescens, and P. putida results in aggregation and increased biofilm formation
Author / Creator:Dueholm, Morten S. ; Søndergaard, Mads T. ; Nilsson, Martin ; Christiansen, Gunna ; Stensballe, Allan ; Overgaard, Michael T. ; Givskov, Michael ; Tolker‐Nielsen, Tim ; Otzen, Daniel E. ; Nielsen, Per H.
Publisher:England: Blackwell Publishing Ltd
Journal title:MicrobiologyOpen (Weinheim), 2013-06, Vol.2 (3), p.365-382
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ArticlesPeer ReviewedFull Text
The Proteome of Tetrasphaera elongata is adapted to Changing Conditions in Wastewater Treatment Plants
Author / Creator:Herbst, Florian-Alexander ; Dueholm, Morten S ; Wimmer, Reinhard ; Nielsen, Per Halkjær
Publisher:Switzerland: MDPI AG
Journal title:Proteomes, 2019-04, Vol.7 (2), p.16
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ArticlesPeer ReviewedFull Text
Direct Identification of Functional Amyloid Proteins by Label-Free Quantitative Mass Spectrometry
Author / Creator:Danielsen, Heidi N ; Hansen, Susan H ; Herbst, Florian-Alexander ; Kjeldal, Henrik ; Stensballe, Allan ; Nielsen, Per H ; Dueholm, Morten S
Publisher:Switzerland: MDPI AG
Journal title:Biomolecules (Basel, Switzerland), 2017-08, Vol.7 (3), p.58
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ArticlesPeer ReviewedFull Text
On the evolution and physiology of cable bacteria
Author / Creator:Kjeldsen, Kasper U. ; Schreiber, Lars ; Thorup, Casper A. ; Boesen, Thomas ; Bjerg, Jesper T. ; Yang, Tingting ; Dueholm, Morten S. ; Larsen, Steffen ; Risgaard-Petersen, Nils ; Nierychlo, Marta ; Schmid, Markus ; Bøggild, Andreas ; van de Vossenberg, Jack ; Geelhoed, Jeanine S. ; Meysman, Filip J. R. ; Wagner, Michael ; Nielsen, Per H. ; Nielsen, Lars Peter ; Schramm, Andreas
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2019-09, Vol.116 (38), p.19116-19125
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ArticlesPeer ReviewedFull Text
The impact of immigration on microbial community composition in full-scale anaerobic digesters
Author / Creator:Kirkegaard, Rasmus H. ; McIlroy, Simon J. ; Kristensen, Jannie M. ; Nierychlo, Marta ; Karst, Søren M. ; Dueholm, Morten S. ; Albertsen, Mads ; Nielsen, Per H.
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2017-08, Vol.7 (1), p.9343-11, Article 9343
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ArticlesPeer ReviewedFull Text
Expression of Fap amyloids in P seudomonas aeruginosa , P . fluorescens, and P . putida results in aggregation and increased biofilm formation
Author / Creator:Dueholm, Morten S. ; Søndergaard, Mads T. ; Nilsson, Martin ; Christiansen, Gunna ; Stensballe, Allan ; Overgaard, Michael T. ; Givskov, Michael ; Tolker‐Nielsen, Tim ; Otzen, Daniel E. ; Nielsen, Per H.
Publisher:Bognor Regis: John Wiley & Sons, Inc
Journal title:MicrobiologyOpen (Weinheim), 2013-06, Vol.2 (3), p.365-382
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ArticlesFull Text
Thousands of primer-free, high-quality, full-length SSU rRNA sequences from all domains of life
Author / Creator:Karst, Soeren M ; Dueholm, Morten S ; Mcilroy, Simon J ; Kirkegaard, Rasmus H ; Nielsen, Per H ; Albertsen, Mads
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2016-08
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ArticlesPeer ReviewedFull Text
Evolutionary Insight into the Functional Amyloids of the Pseudomonads: e76630
Author / Creator:Dueholm, Morten S ; Otzen, Daniel ; Nielsen, Per Halkjaer
Journal title:PloS one, 2013-10, Vol.8 (10)
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ArticlesFull Text
The proteome of Tetrasphaera elongata is adapted to changing conditions in wastewater treatment plants
Author / Creator:Florian-Alexander Herbst ; Morten Simonsen Dueholm ; Wimmer, Reinhard ; Nielsen, Per H
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2019-04
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ArticlesFull Text
Species-level microbiome composition of activated sludge - introducing the MiDAS 3 ecosystem-specific reference database and taxonomy
Author / Creator:Nierychlo, Marta ; Andersen, Kasper Skytte ; Xu, Yijuan ; Green, Nick ; Albertsen, Mads ; Morten Simonsen Dueholm ; Nielsen, Per H
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2019-11
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ArticlesFull Text
Connecting structure to function with the recovery of over 1000 high-quality activated sludge metagenome-assembled genomes encoding full-length rRNA genes using long-read sequencing
Author / Creator:Singleton, Caitlin M ; Petriglieri, Francesca ; Kristensen, Jannie M ; Kirkegaard, Rasmus H ; Michaelsen, Thomas Y ; Andersen, Martin H ; Kondrotaite, Zivile ; Karst, Søren M ; Dueholm, Morten S ; Nielsen, Per H ; Albertsen, Mads
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2020-05
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ArticlesFull Text
Overexpression of human alpha-Synuclein leads to dysregulated microbiome/metabolites with ageing in a rat model of Parkinson disease
Author / Creator:Singh, Yogesh ; Trautwein, Christoph ; Romani, Joan ; Salker, Madhuri S ; Neckel, Peter H ; Fraccaroli, Isabel ; Abeditashi, Mahkameh ; Woerner, Nils ; Admard, Jakob ; Dhariwal, Achal ; Dueholm, Morten S ; Karl-Herbert Schäfer ; Lang, Florian ; Otzen, Daniel ; Lashuel, Hilal A ; Riess, Olaf ; Casadei, Nicolas
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2020-12
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ArticlesFull Text
Identifying the abundant and active microorganisms common to full scale anaerobic digesters
Author / Creator:Rasmus Hansen Kirkegaard ; Mcilroy, Simon Jon ; Jannie Munk Kristensen ; Nierychlo, Marta ; Karst, Soeren Michael ; Morten Simonsen Dueholm ; Albertsen, Mads ; Per Halkjaer Nielsen
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2017-01
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Connecting structure to function with the recovery of over 1000 high-quality metagenome-assembled genomes from activated sludge using long-read sequencing

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Retrieval of a million high-quality, full-length microbial 16S and 18S rRNA gene sequences without primer bias

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Curli functional amyloid systems are phylogenetically widespread and display large diversity in operon and protein structure

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Evolutionary insight into the functional amyloids of the pseudomonads

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Expression of Fap amyloids in Pseudomonas aeruginosa, P. fluorescens, and P. putida results in aggregation and increased biofilm formation

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The Proteome of Tetrasphaera elongata is adapted to Changing Conditions in Wastewater Treatment Plants

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Direct Identification of Functional Amyloid Proteins by Label-Free Quantitative Mass Spectrometry

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On the evolution and physiology of cable bacteria

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The impact of immigration on microbial community composition in full-scale anaerobic digesters

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Expression of Fap amyloids in P seudomonas aeruginosa , P . fluorescens, and P . putida results in aggregation and increased biofilm formation

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Thousands of primer-free, high-quality, full-length SSU rRNA sequences from all domains of life

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Evolutionary Insight into the Functional Amyloids of the Pseudomonads: e76630

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The proteome of Tetrasphaera elongata is adapted to changing conditions in wastewater treatment plants

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Species-level microbiome composition of activated sludge - introducing the MiDAS 3 ecosystem-specific reference database and taxonomy

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Connecting structure to function with the recovery of over 1000 high-quality activated sludge metagenome-assembled genomes encoding full-length rRNA genes using long-read sequencing

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Overexpression of human alpha-Synuclein leads to dysregulated microbiome/metabolites with ageing in a rat model of Parkinson disease

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Identifying the abundant and active microorganisms common to full scale anaerobic digesters

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