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ArticlesPeer ReviewedFull Text
Single-cell genomics-based analysis of virus–host interactions in marine surface bacterioplankton
Author / Creator:Labonté, Jessica M ; Swan, Brandon K ; Poulos, Bonnie ; Luo, Haiwei ; Koren, Sergey ; Hallam, Steven J ; Sullivan, Matthew B ; Woyke, Tanja ; Eric Wommack, K ; Stepanauskas, Ramunas
Publisher:London: Nature Publishing Group UK
Journal title:The ISME Journal, 2015-11, Vol.9 (11), p.2386-2399
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Groundtruthing Next-Gen Sequencing for Microbial Ecology–Biases and Errors in Community Structure Estimates from PCR Amplicon Pyrosequencing
Author / Creator:Lee, Charles K. ; Herbold, Craig W. ; Polson, Shawn W. ; Wommack, K. Eric ; Williamson, Shannon J. ; McDonald, Ian R. ; Cary, S. Craig
Publisher:United States: Public Library of Science
Journal title:PloS one, 2012-09, Vol.7 (9), p.e44224-e44224
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A multitrophic model to quantify the effects of marine viruses on microbial food webs and ecosystem processes
Author / Creator:Weitz, Joshua S ; Stock, Charles A ; Wilhelm, Steven W ; Bourouiba, Lydia ; Coleman, Maureen L ; Buchan, Alison ; Follows, Michael J ; Fuhrman, Jed A ; Jover, Luis F ; Lennon, Jay T ; Middelboe, Mathias ; Sonderegger, Derek L ; Suttle, Curtis A ; Taylor, Bradford P ; Frede Thingstad, T ; Wilson, William H ; Eric Wommack, K
Publisher:London: Nature Publishing Group UK
Journal title:The ISME Journal, 2015-06, Vol.9 (6), p.1352-1364
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ArticlesPeer ReviewedFull Text
Iroki: automatic customization and visualization of phylogenetic trees
Author / Creator:Moore, Ryan M. ; Harrison, Amelia O. ; McAllister, Sean M. ; Polson, Shawn W. ; Wommack, K. Eric
Publisher:United States: PeerJ. Ltd
Journal title:PeerJ (San Francisco, CA), 2020-02, Vol.8, p.e8584-e8584, Article e8584
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Towards an integrative view of virus phenotypes
Author / Creator:DeLong, John P. ; Al-Sammak, Maitham A. ; Al-Ameeli, Zeina T. ; Dunigan, David D. ; Edwards, Kyle F. ; Fuhrmann, Jeffry J. ; Gleghorn, Jason P. ; Li, Hanqun ; Haramoto, Kona ; Harrison, Amelia O. ; Marston, Marcia F. ; Moore, Ryan M. ; Polson, Shawn W. ; Ferrell, Barbra D. ; Salsbery, Miranda E. ; Schvarcz, Christopher R. ; Shirazi, Jasmine ; Steward, Grieg F. ; Van Etten, James L. ; Wommack, K. Eric
Publisher:London: Nature Publishing Group UK
Journal title:Nature reviews. Microbiology, 2022-02, Vol.20 (2), p.83-94
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Assessing the efficacy of eDNA metabarcoding for measuring microbial biodiversity within forest ecosystems
Author / Creator:Ladin, Zachary S. ; Ferrell, Barbra ; Dums, Jacob T. ; Moore, Ryan M. ; Levia, Delphis F. ; Shriver, W. Gregory ; D’Amico, Vincent ; Trammell, Tara L. E. ; Setubal, João Carlos ; Wommack, K. Eric
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2021-01, Vol.11 (1), p.1629-14, Article 1629
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Improvements in viral gene annotation using large language models and soft alignments
Author / Creator:Harrigan, William L. ; Ferrell, Barbra D. ; Wommack, K. Eric ; Polson, Shawn W. ; Schreiber, Zachary D. ; Belcaid, Mahdi
Publisher:England: BioMed Central Ltd
Journal title:BMC bioinformatics, 2024-04, Vol.25 (1), p.165-165, Article 165
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Genome of Phaeocystis globosa virus PgV-16T highlights the common ancestry of the largest known DNA viruses infecting eukaryotes
Author / Creator:Santini, Sebastien ; Jeudy, Sandra ; Bartoli, Julia ; Poirot, Olivier ; Lescot, Magali ; Abergel, Chantal ; Barbe, Valérie ; Wommack, K. Eric ; Noordeloos, Anna A. M. ; Brussaard, Corina P. D. ; Claverie, Jean-Michel
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2013-06, Vol.110 (26), p.10800-10805
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Impacts of Poultry House Environment on Poultry Litter Bacterial Community Composition
Author / Creator:Dumas, Michael D. ; Polson, Shawn W. ; Ritter, Don ; Ravel, Jacques ; Gelb, Jack ; Morgan, Robin ; Wommack, K. Eric
Publisher:United States: Public Library of Science
Journal title:PloS one, 2011-09, Vol.6 (9), p.e24785-e24785
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ArticlesPeer ReviewedFull Text
Re-examination of the relationship between marine virus and microbial cell abundances
Author / Creator:Wigington, Charles H. ; Sonderegger, Derek ; Brussaard, Corina P. D. ; Buchan, Alison ; Finke, Jan F. ; Fuhrman, Jed A. ; Lennon, Jay T. ; Middelboe, Mathias ; Suttle, Curtis A. ; Stock, Charles ; Wilson, William H. ; Wommack, K. Eric ; Wilhelm, Steven W. ; Weitz, Joshua S.
Publisher:London: Nature Publishing Group UK
Journal title:Nature microbiology, 2016-01, Vol.1 (3), p.15024-15024, Article 15024
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ArticlesPeer ReviewedFull Text
Soybean Bradyrhizobium spp. Spontaneously Produce Abundant and Diverse Temperate Phages in Culture
Author / Creator:Richards, Vanessa A. ; Ferrell, Barbra D. ; Polson, Shawn W. ; Wommack, K. Eric ; Fuhrmann, Jeffry J.
Publisher:Switzerland: MDPI AG
Journal title:Viruses, 2024-11, Vol.16 (11), p.1750
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Novel chaperonins are prevalent in the virioplankton and demonstrate links to viral biology and ecology
Author / Creator:Marine, Rachel L ; Nasko, Daniel J ; Wray, Jeffrey ; Polson, Shawn W ; Wommack, K Eric
Publisher:London: Nature Publishing Group UK
Journal title:The ISME Journal, 2017-11, Vol.11 (11), p.2479-2491
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Ribonucleotide reductases reveal novel viral diversity and predict biological and ecological features of unknown marine viruses
Author / Creator:Sakowski, Eric G. ; Munsell, Erik V. ; Hyatt, Mara ; Kress, William ; Williamson, Shannon J. ; Nasko, Daniel J. ; Polson, Shawn W. ; Wommack, K. Eric
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2014-11, Vol.111 (44), p.15786-15791
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Dynamics of autochthonous soil viral communities parallels dynamics of host communities under nutrient stimulation
Author / Creator:Srinivasiah, Sharath ; Lovett, Jacqueline ; Ghosh, Dhritiman ; Roy, Krishnakali ; Fuhrmann, Jeffry J. ; Radosevich, Mark ; Wommack, K. Eric
Publisher:England: Oxford University Press
Journal title:FEMS microbiology ecology, 2015-07, Vol.91 (7), p.fiv063
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Shotgun metagenomics indicates novel family A DNA polymerases predominate within marine virioplankton
Author / Creator:Schmidt, Helen F ; Sakowski, Eric G ; Williamson, Shannon J ; Polson, Shawn W ; Wommack, KEric
Publisher:London: Nature Publishing Group UK
Journal title:The ISME Journal, 2014-01, Vol.8 (1), p.103-114
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Repeating patterns of virioplankton production within an estuarine ecosystem
Author / Creator:Winget, Danielle M ; Helton, Rebekah R ; Williamson, Kurt E ; Bench, Shellie R ; Williamson, Shannon J ; Wommack, K. Eric
Publisher:United States: National Academy of Sciences
Journal title:Proceedings of the National Academy of Sciences - PNAS, 2011-07, Vol.108 (28), p.11506-11511
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Lysogenic virus–host interactions predominate at deep-sea diffuse-flow hydrothermal vents
Author / Creator:Williamson, Shannon J ; Cary, S Craig ; Williamson, Kurt E ; Helton, Rebekah R ; Bench, Shellie R ; Winget, Danielle ; Wommack, K Eric
Publisher:London: Nature Publishing Group UK
Journal title:The ISME Journal, 2008-11, Vol.2 (11), p.1112-1121
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Recovery of SARS-CoV-2 from Wastewater Using Centrifugal Ultrafiltration
Author / Creator:Anderson-Coughlin, Brienna L. ; Shearer, Adrienne E. H. ; Omar, Alexis N. ; Wommack, K. Eric ; Kniel, Kalmia E.
Publisher:Basel: MDPI AG
Journal title:Methods and protocols, 2021-05, Vol.4 (2), p.32
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Microbiome, demystifying the role of microbial communities in the biosphere
Author / Creator:Wommack, K Eric ; Ravel, Jacques
Publisher:England: BioMed Central Ltd
Journal title:Microbiome, 2013-01, Vol.1 (1), p.1-1, Article 1
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ArticlesPeer ReviewedFull Text
Oyster calcifying fluid harbors persistent and dynamic autochthonous bacterial populations that may aid in shell formation
Author / Creator:Sakowski, Eric G. ; Wommack, K. Eric ; Polson, Shawn W.
Publisher:Germany: Inter-Research Science Center
Journal title:Marine ecology. Progress series (Halstenbek), 2020-10, Vol.653, p.57-75
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Showing 1 to 20 of 45 results

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Single-cell genomics-based analysis of virus–host interactions in marine surface bacterioplankton

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Groundtruthing Next-Gen Sequencing for Microbial Ecology–Biases and Errors in Community Structure Estimates from PCR Amplicon Pyrosequencing

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A multitrophic model to quantify the effects of marine viruses on microbial food webs and ecosystem processes

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Iroki: automatic customization and visualization of phylogenetic trees

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Towards an integrative view of virus phenotypes

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Assessing the efficacy of eDNA metabarcoding for measuring microbial biodiversity within forest ecosystems

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Improvements in viral gene annotation using large language models and soft alignments

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Genome of Phaeocystis globosa virus PgV-16T highlights the common ancestry of the largest known DNA viruses infecting eukaryotes

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Impacts of Poultry House Environment on Poultry Litter Bacterial Community Composition

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Re-examination of the relationship between marine virus and microbial cell abundances

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Soybean Bradyrhizobium spp. Spontaneously Produce Abundant and Diverse Temperate Phages in Culture

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Novel chaperonins are prevalent in the virioplankton and demonstrate links to viral biology and ecology

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Ribonucleotide reductases reveal novel viral diversity and predict biological and ecological features of unknown marine viruses

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Dynamics of autochthonous soil viral communities parallels dynamics of host communities under nutrient stimulation

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Shotgun metagenomics indicates novel family A DNA polymerases predominate within marine virioplankton

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Repeating patterns of virioplankton production within an estuarine ecosystem

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Lysogenic virus–host interactions predominate at deep-sea diffuse-flow hydrothermal vents

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Recovery of SARS-CoV-2 from Wastewater Using Centrifugal Ultrafiltration

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Microbiome, demystifying the role of microbial communities in the biosphere

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Oyster calcifying fluid harbors persistent and dynamic autochthonous bacterial populations that may aid in shell formation

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