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ArticlesPeer ReviewedFull Text
Detection of Haplotypes Associated with Prenatal Death in Dairy Cattle and Identification of Deleterious Mutations in GART, SHBG and SLC37A2
Author / Creator:Fritz, Sébastien ; Capitan, Aurelien ; Djari, Anis ; Rodriguez, Sabrina C. ; Barbat, Anne ; Baur, Aurélia ; Grohs, Cécile ; Weiss, Bernard ; Boussaha, Mekki ; Esquerré, Diane ; Klopp, Christophe ; Rocha, Dominique ; Boichard, Didier
Publisher:United States: Public Library of Science
Journal title:PloS one, 2013-06, Vol.8 (6), p.e65550-e65550
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An integrative atlas of chicken long non-coding genes and their annotations across 25 tissues
Author / Creator:Jehl, Frédéric ; Muret, Kévin ; Bernard, Maria ; Boutin, Morgane ; Lagoutte, Laetitia ; Désert, Colette ; Dehais, Patrice ; Esquerré, Diane ; Acloque, Hervé ; Giuffra, Elisabetta ; Djebali, Sarah ; Foissac, Sylvain ; Derrien, Thomas ; Pitel, Frédérique ; Zerjal, Tatiana ; Klopp, Christophe ; Lagarrigue, Sandrine
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2020-11, Vol.10 (1), p.20457-17, Article 20457
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Genome-Wide Study of Structural Variants in Bovine Holstein, Montbéliarde and Normande Dairy Breeds
Author / Creator:Boussaha, Mekki ; Esquerré, Diane ; Barbieri, Johanna ; Djari, Anis ; Pinton, Alain ; Letaief, Rabia ; Salin, Gérald ; Escudié, Frédéric ; Roulet, Alain ; Fritz, Sébastien ; Samson, Franck ; Grohs, Cécile ; Bernard, Maria ; Klopp, Christophe ; Boichard, Didier ; Rocha, Dominique
Publisher:United States: Public Library of Science
Journal title:PloS one, 2015-08, Vol.10 (8), p.e0135931-e0135931
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Multi-species annotation of transcriptome and chromatin structure in domesticated animals
Author / Creator:Foissac, Sylvain ; Djebali, Sarah ; Munyard, Kylie ; Vialaneix, Nathalie ; Rau, Andrea ; Muret, Kevin ; Esquerré, Diane ; Zytnicki, Matthias ; Derrien, Thomas ; Bardou, Philippe ; Blanc, Fany ; Cabau, Cédric ; Crisci, Elisa ; Dhorne-Pollet, Sophie ; Drouet, Françoise ; Faraut, Thomas ; Gonzalez, Ignacio ; Goubil, Adeline ; Lacroix-Lamandé, Sonia ; Laurent, Fabrice ; Marthey, Sylvain ; Marti-Marimon, Maria ; Momal-Leisenring, Raphaelle ; Mompart, Florence ; Quéré, Pascale ; Robelin, David ; Cristobal, Magali San ; Tosser-Klopp, Gwenola ; Vincent-Naulleau, Silvia ; Fabre, Stéphane ; Pinard-Van der Laan, Marie-Hélène ; Klopp, Christophe ; Tixier-Boichard, Michèle ; Acloque, Hervé ; Lagarrigue, Sandrine ; Giuffra, Elisabetta
Publisher:England: BioMed Central Ltd
Journal title:BMC biology, 2019-12, Vol.17 (1), p.108-108, Article 108
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Dynamic gene expression in fish muscle during recovery growth induced by a fasting-refeeding schedule
Author / Creator:Rescan, Pierre-Yves ; Montfort, Jerome ; Rallière, Cécile ; Le Cam, Aurélie ; Esquerré, Diane ; Hugot, Karine
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2007-11, Vol.8 (1), p.438-438
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ArticlesPeer ReviewedFull Text
Survey of allele specific expression in bovine muscle
Author / Creator:Guillocheau, Gabriel M. ; El Hou, Abdelmajid ; Meersseman, Cédric ; Esquerré, Diane ; Rebours, Emmanuelle ; Letaief, Rabia ; Simao, Morgane ; Hypolite, Nicolas ; Bourneuf, Emmanuelle ; Bruneau, Nicolas ; Vaiman, Anne ; Vander Jagt, Christy J. ; Chamberlain, Amanda J. ; Rocha, Dominique
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2019-03, Vol.9 (1), p.4297-4297, Article 4297
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Quantitative trait loci for resistance to Flavobacterium psychrophilum in rainbow trout: effect of the mode of infection and evidence of epistatic interactions
Author / Creator:Fraslin, Clémence ; Dechamp, Nicolas ; Bernard, Maria ; Krieg, Francine ; Hervet, Caroline ; Guyomard, René ; Esquerré, Diane ; Barbieri, Johanna ; Kuchly, Claire ; Duchaud, Eric ; Boudinot, Pierre ; Rochat, Tatiana ; Bernardet, Jean-François ; Quillet, Edwige
Publisher:France: BioMed Central Ltd
Journal title:Genetics selection evolution (Paris), 2018-11, Vol.50 (1), p.60-60, Article 60
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Progressive ataxia of Charolais cattle highlights a role of KIF1C in sustainable myelination
Author / Creator:Duchesne, Amandine ; Vaiman, Anne ; Frah, Magali ; Floriot, Sandrine ; Legoueix-Rodriguez, Sabrina ; Desmazières, Anne ; Fritz, Sébastien ; Beauvallet, Christian ; Albaric, Olivier ; Venot, Eric ; Bertaud, Maud ; Saintilan, Romain ; Guatteo, Raphaël ; Esquerré, Diane ; Branchu, Julien ; Fleming, Anaïs ; Brice, Alexis ; Darios, Frédéric ; Vilotte, Jean-Luc ; Stevanin, Giovanni ; Boichard, Didier ; El Hachimi, Khalid Hamid
Publisher:United States: Public Library of Science
Journal title:PLoS genetics, 2018-08, Vol.14 (8), p.e1007550-e1007550
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ArticlesPeer ReviewedFull Text
Long noncoding RNA repertoire in chicken liver and adipose tissue
Author / Creator:Muret, Kévin ; Klopp, Christophe ; Wucher, Valentin ; Esquerré, Diane ; Legeai, Fabrice ; Lecerf, Frédéric ; Désert, Colette ; Boutin, Morgane ; Jehl, Frédéric ; Acloque, Hervé ; Giuffra, Elisabetta ; Djebali, Sarah ; Foissac, Sylvain ; Derrien, Thomas ; Lagarrigue, Sandrine
Publisher:France: BioMed Central Ltd
Journal title:Genetics selection evolution (Paris), 2017-01, Vol.49 (1), p.6-6, Article 6
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Identification of copy number variation in French dairy and beef breeds using next-generation sequencing
Author / Creator:Letaief, Rabia ; Rebours, Emmanuelle ; Grohs, Cécile ; Meersseman, Cédric ; Fritz, Sébastien ; Trouilh, Lidwine ; Esquerré, Diane ; Barbieri, Johanna ; Klopp, Christophe ; Philippe, Romain ; Blanquet, Véronique ; Boichard, Didier ; Rocha, Dominique ; Boussaha, Mekki
Publisher:France: BioMed Central Ltd
Journal title:Genetics selection evolution (Paris), 2017-10, Vol.49 (1), p.77-77, Article 77
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ArticlesPeer ReviewedFull Text
Author Correction: An integrative atlas of chicken long non-coding genes and their annotations across 25 tissues
Author / Creator:Jehl, Frédéric ; Muret, Kévin ; Bernard, Maria ; Boutin, Morgane ; Lagoutte, Laetitia ; Désert, Colette ; Dehais, Patrice ; Esquerré, Diane ; Acloque, Hervé ; Giuffra, Elisabetta ; Djebali, Sarah ; Foissac, Sylvain ; Derrien, Thomas ; Pitel, Frédérique ; Zerjal, Tatiana ; Klopp, Christophe ; Lagarrigue, Sandrine
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2021-04, Vol.11 (1), p.9463-9463, Article 9463
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Transcriptome analysis of porcine PBMCs after in vitro stimulation by LPS or PMA/ionomycin using an expression array targeting the pig immune response
Author / Creator:Gao, Yu ; Flori, Laurence ; Lecardonnel, Jérome ; Esquerré, Diane ; Hu, Zhi-Liang ; Teillaud, Angélique ; Lemonnier, Gaëtan ; Lefèvre, Francois ; Oswald, Isabelle P ; Rogel-Gaillard, Claire
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2010-05, Vol.11 (1), p.292-292, Article 292
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A missense variant in the coil1A domain of the keratin 25 gene is associated with the dominant curly hair coat trait (Crd) in horse
Author / Creator:Morgenthaler, Caroline ; Diribarne, Mathieu ; Capitan, Aurélien ; Legendre, Rachel ; Saintilan, Romain ; Gilles, Maïlys ; Esquerré, Diane ; Juras, Rytis ; Khanshour, Anas ; Schibler, Laurent ; Cothran, Gus
Publisher:France: BioMed Central Ltd
Journal title:Genetics selection evolution (Paris), 2017-11, Vol.49 (1), p.85-85, Article 85
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Extensive Expression Differences along Porcine Small Intestine Evidenced by Transcriptome Sequencing
Author / Creator:Mach, Núria ; Berri, Mustapha ; Esquerré, Diane ; Chevaleyre, Claire ; Lemonnier, Gaëtan ; Billon, Yvon ; Lepage, Patricia ; Oswald, Isabelle P. ; Doré, Joël ; Rogel-Gaillard, Claire ; Estellé, Jordi
Publisher:United States: Public Library of Science
Journal title:PloS one, 2014-02, Vol.9 (2), p.e88515-e88515
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Expression profiling of rainbow trout testis development identifies evolutionary conserved genes involved in spermatogenesis
Author / Creator:Rolland, Antoine D ; Lareyre, Jean-Jacques ; Goupil, Anne-Sophie ; Montfort, Jérôme ; Ricordel, Marie-Jo ; Esquerré, Diane ; Hugot, Karine ; Houlgatte, Rémi ; Chalmel, Fréderic ; Le Gac, Florence
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2009-11, Vol.10 (1), p.546-546, Article 546
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Bovine and murine models highlight novel roles for SLC25A46 in mitochondrial dynamics and metabolism, with implications for human and animal health
Author / Creator:Duchesne, Amandine ; Vaiman, Anne ; Castille, Johan ; Beauvallet, Christian ; Gaignard, Pauline ; Floriot, Sandrine ; Rodriguez, Sabrina ; Vilotte, Marthe ; Boulanger, Laurent ; Passet, Bruno ; Albaric, Olivier ; Guillaume, François ; Boukadiri, Abdelhak ; Richard, Laurence ; Bertaud, Maud ; Timsit, Edouard ; Guatteo, Raphaël ; Jaffrézic, Florence ; Calvel, Pierre ; Helary, Louise ; Mahla, Rachid ; Esquerré, Diane ; Péchoux, Christine ; Liuu, Sophie ; Vallat, Jean-Michel ; Boichard, Didier ; Slama, Abdelhamid ; Vilotte, Jean-Luc
Publisher:United States: Public Library of Science
Journal title:PLoS genetics, 2017-04, Vol.13 (4), p.e1006597-e1006597
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Genome-Wide Characterization of RNA Editing in Chicken Embryos Reveals Common Features among Vertebrates
Author / Creator:Frésard, Laure ; Leroux, Sophie ; Roux, Pierre-François ; Klopp, Christophe ; Fabre, Stéphane ; Esquerré, Diane ; Dehais, Patrice ; Djari, Anis ; Gourichon, David ; Lagarrigue, Sandrine ; Pitel, Frédérique
Publisher:United States: Public Library of Science
Journal title:PloS one, 2015-05, Vol.10 (5), p.e0126776-20
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Changes induced by dietary energy intake and divergent selection for muscle fat content in rainbow trout (Oncorhynchus mykiss), assessed by transcriptome and proteome analysis of the liver
Author / Creator:Kolditz, Catherine-Ines ; Paboeuf, Gilles ; Borthaire, Maïena ; Esquerré, Diane ; SanCristobal, Magali ; Lefèvre, Florence ; Médale, Françoise
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2008-10, Vol.9 (1), p.506-506, Article 506
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Correction to: Quantitative trait loci for resistance to Flavobacterium psychrophilum in rainbow trout: effect of the mode of infection and evidence of epistatic interactions
Author / Creator:Fraslin, Clémence ; Dechamp, Nicolas ; Bernard, Maria ; Krieg, Francine ; Hervet, Caroline ; Guyomard, René ; Esquerré, Diane ; Barbieri, Johanna ; Kuchly, Claire ; Duchaud, Eric ; Boudinot, Pierre ; Rochat, Tatiana ; Bernardet, Jean-François ; Quillet, Edwige
Publisher:France: BioMed Central Ltd
Journal title:Genetics selection evolution (Paris), 2019-03, Vol.51 (1), p.11-11, Article 11
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Construction of a large collection of small genome variations in French dairy and beef breeds using whole-genome sequences
Author / Creator:Boussaha, Mekki ; Michot, Pauline ; Letaief, Rabia ; Hozé, Chris ; Fritz, Sébastien ; Grohs, Cécile ; Esquerré, Diane ; Duchesne, Amandine ; Philippe, Romain ; Blanquet, Véronique ; Phocas, Florence ; Floriot, Sandrine ; Rocha, Dominique ; Klopp, Christophe ; Capitan, Aurélien ; Boichard, Didier
Publisher:France: BioMed Central Ltd
Journal title:Genetics selection evolution (Paris), 2016-11, Vol.48 (1), p.87-87, Article 87
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Detection of Haplotypes Associated with Prenatal Death in Dairy Cattle and Identification of Deleterious Mutations in GART, SHBG and SLC37A2

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An integrative atlas of chicken long non-coding genes and their annotations across 25 tissues

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Genome-Wide Study of Structural Variants in Bovine Holstein, Montbéliarde and Normande Dairy Breeds

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Multi-species annotation of transcriptome and chromatin structure in domesticated animals

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Dynamic gene expression in fish muscle during recovery growth induced by a fasting-refeeding schedule

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Survey of allele specific expression in bovine muscle

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Quantitative trait loci for resistance to Flavobacterium psychrophilum in rainbow trout: effect of the mode of infection and evidence of epistatic interactions

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Progressive ataxia of Charolais cattle highlights a role of KIF1C in sustainable myelination

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Long noncoding RNA repertoire in chicken liver and adipose tissue

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Identification of copy number variation in French dairy and beef breeds using next-generation sequencing

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Author Correction: An integrative atlas of chicken long non-coding genes and their annotations across 25 tissues

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Transcriptome analysis of porcine PBMCs after in vitro stimulation by LPS or PMA/ionomycin using an expression array targeting the pig immune response

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A missense variant in the coil1A domain of the keratin 25 gene is associated with the dominant curly hair coat trait (Crd) in horse

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Extensive Expression Differences along Porcine Small Intestine Evidenced by Transcriptome Sequencing

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Expression profiling of rainbow trout testis development identifies evolutionary conserved genes involved in spermatogenesis

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Bovine and murine models highlight novel roles for SLC25A46 in mitochondrial dynamics and metabolism, with implications for human and animal health

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Genome-Wide Characterization of RNA Editing in Chicken Embryos Reveals Common Features among Vertebrates

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Changes induced by dietary energy intake and divergent selection for muscle fat content in rainbow trout (Oncorhynchus mykiss), assessed by transcriptome and proteome analysis of the liver

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Correction to: Quantitative trait loci for resistance to Flavobacterium psychrophilum in rainbow trout: effect of the mode of infection and evidence of epistatic interactions

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Construction of a large collection of small genome variations in French dairy and beef breeds using whole-genome sequences

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