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134 results for Expressed+Sequence+Tags+-+metabolism

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ArticlesPeer ReviewedFull Text
De novo assembly, gene annotation and marker development using Illumina paired-end transcriptome sequences in celery (Apium graveolens L.)
Author / Creator:Fu, Nan ; Wang, Qian ; Shen, Huo-Lin
Publisher:United States: Public Library of Science
Journal title:PloS one, 2013-02, Vol.8 (2), p.e57686-e57686
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A survey of the complex transcriptome from the highly polyploid sugarcane genome using full-length isoform sequencing and de novo assembly from short read sequencing
Author / Creator:Hoang, Nam V ; Furtado, Agnelo ; Mason, Patrick J ; Marquardt, Annelie ; Kasirajan, Lakshmi ; Thirugnanasambandam, Prathima P ; Botha, Frederik C ; Henry, Robert J
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2017-05, Vol.18 (1), p.395-395, Article 395
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Single nucleotide polymorphism discovery in elite North American potato germplasm
Author / Creator:Hamilton, John P ; Hansey, Candice N ; Whitty, Brett R ; Stoffel, Kevin ; Massa, Alicia N ; Van Deynze, Allen ; De Jong, Walter S ; Douches, David S ; Buell, C Robin
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2011-06, Vol.12 (1), p.302-302, Article 302
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Transcriptome sequencing of lentil based on second-generation technology permits large-scale unigene assembly and SSR marker discovery
Author / Creator:Kaur, Sukhjiwan ; Cogan, Noel O I ; Pembleton, Luke W ; Shinozuka, Maiko ; Savin, Keith W ; Materne, Michael ; Forster, John W
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2011-05, Vol.12 (1), p.265-265, Article 265
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Deep sequencing discovery of novel and conserved microRNAs in trifoliate orange (Citrus trifoliata)
Author / Creator:Song, Changnian ; Wang, Chen ; Zhang, Changqing ; Korir, Nicholas Kibet ; Yu, Huaping ; Ma, Zhengqiang ; Fang, Jinggui
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2010-07, Vol.11 (1), p.431-431, Article 431
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Transcriptome sequencing of mung bean (Vigna radiate L.) genes and the identification of EST-SSR markers
Author / Creator:Chen, Honglin ; Wang, Lixia ; Wang, Suhua ; Liu, Chunji ; Blair, Matthew Wohlgemuth ; Cheng, Xuzhen
Publisher:United States: Public Library of Science
Journal title:PloS one, 2015-04, Vol.10 (4), p.e0120273-e0120273
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De novo assembly and characterization of bark transcriptome using Illumina sequencing and development of EST-SSR markers in rubber tree (Hevea brasiliensis Muell. Arg.)
Author / Creator:Li, Dejun ; Deng, Zhi ; Qin, Bi ; Liu, Xianghong ; Men, Zhonghua
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2012-05, Vol.13 (1), p.192-192
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Transcriptome analysis reveals ginsenosides biosynthetic genes, microRNAs and simple sequence repeats in Panax ginseng C. A. Meyer
Author / Creator:Li, Chunfang ; Zhu, Yingjie ; Guo, Xu ; Sun, Chao ; Luo, Hongmei ; Song, Jingyuan ; Li, Ying ; Wang, Lizhi ; Qian, Jun ; Chen, Shilin
Publisher:England: BioMed Central
Journal title:BMC genomics, 2013-04, Vol.14 (1), p.245-245
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Deep developmental transcriptome sequencing uncovers numerous new genes and enhances gene annotation in the sponge Amphimedon queenslandica
Author / Creator:Fernandez-Valverde, Selene L ; Calcino, Andrew D ; Degnan, Bernard M
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2015-05, Vol.16 (1), p.387-387, Article 387
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Transcriptome assembly, profiling and differential gene expression analysis of the halophyte Suaeda fruticosa provides insights into salt tolerance
Author / Creator:Diray-Arce, Joann ; Clement, Mark ; Gul, Bilquees ; Khan, M Ajmal ; Nielsen, Brent L
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2015-05, Vol.16 (1), p.353-353, Article 353
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ArticlesPeer ReviewedFull Text
Transcriptome sequencing of field pea and faba bean for discovery and validation of SSR genetic markers
Author / Creator:Kaur, Sukhjiwan ; Pembleton, Luke W ; Cogan, Noel O I ; Savin, Keith W ; Leonforte, Tony ; Paull, Jeffrey ; Materne, Michael ; Forster, John W
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2012-03, Vol.13 (1), p.104-104, Article 104
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Genome wide transcriptional profile analysis of Vitis amurensis and Vitis vinifera in response to cold stress
Author / Creator:Xin, Haiping ; Zhu, Wei ; Wang, Lina ; Xiang, Yue ; Fang, Linchuan ; Li, Jitao ; Sun, Xiaoming ; Wang, Nian ; Londo, Jason P ; Li, Shaohua
Publisher:United States: Public Library of Science
Journal title:PloS one, 2013-03, Vol.8 (3), p.e58740
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Short read Illumina data for the de novo assembly of a non-model snail species transcriptome (Radix balthica, Basommatophora, Pulmonata), and a comparison of assembler performance
Author / Creator:Feldmeyer, Barbara ; Wheat, Christopher W ; Krezdorn, Nicolas ; Rotter, Björn ; Pfenninger, Markus
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2011-06, Vol.12 (1), p.317-317, Article 317
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Development of microsatellite markers by transcriptome sequencing in two species of Amorphophallus (Araceae)
Author / Creator:Zheng, Xingfei ; Pan, Cheng ; Diao, Ying ; You, Yongning ; Yang, Chaozhu ; Hu, Zhongli
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2013-07, Vol.14 (1), p.490-490, Article 490
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Development of polymorphic EST-SSR markers and their applicability in genetic diversity evaluation in Rhododendron arboreum
Author / Creator:Sharma, Himanshu ; Kumar, Pankaj ; Singh, Abhishek ; Aggarwal, Kanika ; Roy, Joy ; Sharma, Vikas ; Rawat, Sandeep
Publisher:Dordrecht: Springer Netherlands
Journal title:Molecular biology reports, 2020-04, Vol.47 (4), p.2447-2457
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De novo sequencing and characterization of Picrorhiza kurrooa transcriptome at two temperatures showed major transcriptome adjustments
Author / Creator:Gahlan, Parul ; Singh, Heikham Russiachand ; Shankar, Ravi ; Sharma, Niharika ; Kumari, Anita ; Chawla, Vandna ; Ahuja, Paramvir Singh ; Kumar, Sanjay
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2012-03, Vol.13 (1), p.126-126, Article 126
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Transcriptome sequencing and characterization of Japanese scallop Patinopecten yessoensis from different shell color lines
Author / Creator:Ding, Jun ; Zhao, Le ; Chang, Yaqing ; Zhao, Wenming ; Du, Zhenlin ; Hao, Zhenlin
Publisher:United States: Public Library of Science
Journal title:PloS one, 2015-02, Vol.10 (2), p.e0116406-e0116406
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ArticlesPeer ReviewedFull Text
Transcriptome sequencing and comparative analysis of cucumber flowers with different sex types
Author / Creator:Guo, Shaogui ; Zheng, Yi ; Joung, Je-Gun ; Liu, Shiqiang ; Zhang, Zhonghua ; Crasta, Oswald R ; Sobral, Bruno W ; Xu, Yong ; Huang, Sanwen ; Fei, Zhangjun
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2010-06, Vol.11 (1), p.384-384, Article 384
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Microarray analysis and scale-free gene networks identify candidate regulators in drought-stressed roots of loblolly pine (P. taeda L.)
Author / Creator:Lorenz, W Walter ; Alba, Rob ; Yu, Yuan-Sheng ; Bordeaux, John M ; Simões, Marta ; Dean, Jeffrey F D
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2011-05, Vol.12 (1), p.264-264, Article 264
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Transcriptome analysis reveals the time of the fourth round of genome duplication in common carp (Cyprinus carpio)
Author / Creator:Wang, Jin-Tu ; Li, Jiong-Tang ; Zhang, Xiao-Feng ; Sun, Xiao-Wen
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2012-03, Vol.13 (1), p.96-96, Article 96
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De novo assembly, gene annotation and marker development using Illumina paired-end transcriptome sequences in celery (Apium graveolens L.)

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A survey of the complex transcriptome from the highly polyploid sugarcane genome using full-length isoform sequencing and de novo assembly from short read sequencing

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Single nucleotide polymorphism discovery in elite North American potato germplasm

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Transcriptome sequencing of lentil based on second-generation technology permits large-scale unigene assembly and SSR marker discovery

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Deep sequencing discovery of novel and conserved microRNAs in trifoliate orange (Citrus trifoliata)

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Transcriptome sequencing of mung bean (Vigna radiate L.) genes and the identification of EST-SSR markers

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De novo assembly and characterization of bark transcriptome using Illumina sequencing and development of EST-SSR markers in rubber tree (Hevea brasiliensis Muell. Arg.)

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Transcriptome analysis reveals ginsenosides biosynthetic genes, microRNAs and simple sequence repeats in Panax ginseng C. A. Meyer

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Deep developmental transcriptome sequencing uncovers numerous new genes and enhances gene annotation in the sponge Amphimedon queenslandica

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Transcriptome assembly, profiling and differential gene expression analysis of the halophyte Suaeda fruticosa provides insights into salt tolerance

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Transcriptome sequencing of field pea and faba bean for discovery and validation of SSR genetic markers

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Genome wide transcriptional profile analysis of Vitis amurensis and Vitis vinifera in response to cold stress

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Short read Illumina data for the de novo assembly of a non-model snail species transcriptome (Radix balthica, Basommatophora, Pulmonata), and a comparison of assembler performance

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Development of microsatellite markers by transcriptome sequencing in two species of Amorphophallus (Araceae)

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Development of polymorphic EST-SSR markers and their applicability in genetic diversity evaluation in Rhododendron arboreum

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De novo sequencing and characterization of Picrorhiza kurrooa transcriptome at two temperatures showed major transcriptome adjustments

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Transcriptome sequencing and characterization of Japanese scallop Patinopecten yessoensis from different shell color lines

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Transcriptome sequencing and comparative analysis of cucumber flowers with different sex types

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Microarray analysis and scale-free gene networks identify candidate regulators in drought-stressed roots of loblolly pine (P. taeda L.)

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Transcriptome analysis reveals the time of the fourth round of genome duplication in common carp (Cyprinus carpio)

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