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22 results for Fadnavis,+Shreyas

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ArticlesPeer ReviewedFull Text
QSIPrep: an integrative platform for preprocessing and reconstructing diffusion MRI data
Author / Creator:Cieslak, Matthew ; Cook, Philip A. ; He, Xiaosong ; Yeh, Fang-Cheng ; Dhollander, Thijs ; Adebimpe, Azeez ; Aguirre, Geoffrey K. ; Bassett, Danielle S. ; Betzel, Richard F. ; Bourque, Josiane ; Cabral, Laura M. ; Davatzikos, Christos ; Detre, John A. ; Earl, Eric ; Elliott, Mark A. ; Fadnavis, Shreyas ; Fair, Damien A. ; Foran, Will ; Fotiadis, Panagiotis ; Garyfallidis, Eleftherios ; Giesbrecht, Barry ; Gur, Ruben C. ; Gur, Raquel E. ; Kelz, Max B. ; Keshavan, Anisha ; Larsen, Bart S. ; Luna, Beatriz ; Mackey, Allyson P. ; Milham, Michael P. ; Oathes, Desmond J. ; Perrone, Anders ; Pines, Adam R. ; Roalf, David R. ; Richie-Halford, Adam ; Rokem, Ariel ; Sydnor, Valerie J. ; Tapera, Tinashe M. ; Tooley, Ursula A. ; Vettel, Jean M. ; Yeatman, Jason D. ; Grafton, Scott T. ; Satterthwaite, Theodore D.
Publisher:New York: Nature Publishing Group US
Journal title:Nature methods, 2021-07, Vol.18 (7), p.775-778
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Multi-scale V-net architecture with deep feature CRF layers for brain extraction
Author / Creator:Park, Jong Sung ; Fadnavis, Shreyas ; Garyfallidis, Eleftherios
Publisher:London: Nature Publishing Group UK
Journal title:Communications medicine, 2024-02, Vol.4 (1), p.29-29, Article 29
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Multi-view fusion of diffusion MRI microstructural models: a preterm birth study
Author / Creator:Trò, Rosella ; Roascio, Monica ; Tortora, Domenico ; Severino, Mariasavina ; Rossi, Andrea ; Garyfallidis, Eleftherios ; Arnulfo, Gabriele ; Fato, Marco Massimo ; Fadnavis, Shreyas
Publisher:Switzerland: Frontiers Media S.A
Journal title:Frontiers in neuroscience, 2024-12, Vol.18, p.1480735
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Denoising of diffusion MRI in the cervical spinal cord – effects of denoising strategy and acquisition on intra-cord contrast, signal modeling, and feature conspicuity
Author / Creator:Schilling, Kurt G. ; Fadnavis, Shreyas ; Batson, Joshua ; Visagie, Mereze ; Combes, Anna J.E. ; By, Samantha ; McKnight, Colin D. ; Bagnato, Francesca ; Garyfallidis, Eleftherios ; Landman, Bennett A. ; Smith, Seth A. ; O'Grady, Kristin P.
Publisher:United States: Elsevier Inc
Journal title:NeuroImage (Orlando, Fla.), 2023-02, Vol.266, p.119826-119826, Article 119826
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ArticlesPeer ReviewedFull Text
Bifurcated Topological Optimization for IVIM
Author / Creator:Fadnavis, Shreyas ; Endres, Stefan ; Wen, Qiuting ; Wu, Yu-Chien ; Cheng, Hu ; Koudoro, Serge ; Rane, Swati ; Rokem, Ariel ; Garyfallidis, Eleftherios
Publisher:Switzerland: Frontiers Research Foundation
Journal title:Frontiers in neuroscience, 2021-12, Vol.15, p.779025-779025
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Pandora: 4-D White Matter Bundle Population-Based Atlases Derived from Diffusion MRI Fiber Tractography
Author / Creator:Hansen, Colin B ; Yang, Qi ; Lyu, Ilwoo ; Rheault, Francois ; Kerley, Cailey ; Chandio, Bramsh Qamar ; Fadnavis, Shreyas ; Williams, Owen ; Shafer, Andrea T. ; Resnick, Susan M. ; Zald, David H. ; Cutting, Laurie E ; Taylor, Warren D ; Boyd, Brian ; Garyfallidis, Eleftherios ; Anderson, Adam W ; Descoteaux, Maxime ; Landman, Bennett A ; Schilling, Kurt G
Publisher:New York: Springer US
Journal title:Neuroinformatics (Totowa, N.J.), 2021-07, Vol.19 (3), p.447-460
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On the generalizability of diffusion MRI signal representations across acquisition parameters, sequences and tissue types: Chronicles of the MEMENTO challenge
Author / Creator:De Luca, Alberto ; Ianus, Andrada ; Leemans, Alexander ; Palombo, Marco ; Shemesh, Noam ; Zhang, Hui ; Alexander, Daniel C. ; Nilsson, Markus ; Froeling, Martijn ; Biessels, Geert-Jan ; Zucchelli, Mauro ; Frigo, Matteo ; Albay, Enes ; Sedlar, Sara ; Alimi, Abib ; Deslauriers-Gauthier, Samuel ; Deriche, Rachid ; Fick, Rutger ; Afzali, Maryam ; Pieciak, Tomasz ; Bogusz, Fabian ; Aja-Fernández, Santiago ; Özarslan, Evren ; Jones, Derek K. ; Chen, Haoze ; Jin, Mingwu ; Zhang, Zhijie ; Wang, Fengxiang ; Nath, Vishwesh ; Parvathaneni, Prasanna ; Morez, Jan ; Sijbers, Jan ; Jeurissen, Ben ; Fadnavis, Shreyas ; Endres, Stefan ; Rokem, Ariel ; Garyfallidis, Eleftherios ; Sanchez, Irina ; Prchkovska, Vesna ; Rodrigues, Paulo ; Landman, Bennet A. ; Schilling, Kurt G.
Publisher:United States: Elsevier Inc
Journal title:NeuroImage (Orlando, Fla.), 2021-10, Vol.240, p.118367-118367, Article 118367
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ArticlesPeer ReviewedFull Text
QSIPrep: An integrative platform for preprocessing and reconstructing diffusion MRI
Author / Creator:Cieslak, Matthew ; Cook, Philip A. ; He, Xiaosong ; Yeh, Fang-Cheng ; Dhollander, Thijs ; Adebimpe, Azeez ; Aguirre, Geoffrey K. ; Bassett, Danielle S. ; Betzel, Richard F. ; Bourque, Josiane ; Cabral, Laura M. ; Davatzikos, Christos ; Detre, John A. ; Earl, Eric ; Elliott, Mark A. ; Fadnavis, Shreyas ; Fair, Damien A. ; Foran, Will ; Fotiadis, Panagiotis ; Garyfallidis, Eleftherios ; Giesbrecht, Barry ; Gur, Ruben C. ; Gur, Raquel E. ; Kelz, Max ; Keshavan, Anisha ; Larsen, Bart S. ; Luna, Beatriz ; Mackey, Allyson P. ; Milham, Michael P. ; Oathes, Desmond J. ; Perrone, Anders ; Pines, Adam R. ; Roalf, David R. ; Richie-Halford, Adam ; Rokem, Ariel ; Sydnor, Valerie J. ; Tapera, Tinashe M. ; Tooley, Ursula A. ; Vettel, Jean M. ; Yeatman, Jason D. ; Grafton, Scott T. ; Satterthwaite, Theodore D.
Journal title:Nature methods, 2021-06, Vol.18 (7), p.775-778
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ArticlesFull Text
EVAC+: Multi-scale V-net with Deep Feature CRF Layers for Brain Extraction
Author / Creator:Jong Sung Park ; Fadnavis, Shreyas ; Garyfallidis, Eleftherios
Publisher:Ithaca: Cornell University Library, arXiv.org
Journal title:arXiv.org, 2023-01
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ArticlesFull Text
Mapping the "missing" pathways of the anterior cingulate cortex in the human brain
Author / Creator:Tang, Wei ; Guaje, Javier ; Fadnavis, Shreyas ; Garyfallidis, Eleftherios
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2022-10
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Patch2Self: Denoising Diffusion MRI with Self-Supervised Learning
Author / Creator:Fadnavis, Shreyas ; Batson, Joshua ; Garyfallidis, Eleftherios
Publisher:Ithaca: Cornell University Library, arXiv.org
Journal title:arXiv.org, 2020-11
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ArticlesFull Text
Patch2Self denoising of Diffusion MRI with Self-Supervision and Matrix Sketching
Author / Creator:Fadnavis, Shreyas ; Chowdhury, Agniva ; Batson, Joshua ; Drineas, Petros ; Garyfallidis, Eleftherios
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2022-03
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ArticlesFull Text
NUQ: A Noise Metric for Diffusion MRI via Uncertainty Discrepancy Quantification
Author / Creator:Fadnavis, Shreyas ; Sjölund, Jens ; Eklund, Anders ; Garyfallidis, Eleftherios
Publisher:Ithaca: Cornell University Library, arXiv.org
Journal title:arXiv.org, 2022-03
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ArticlesFull Text
MVD-Fuse: Detection of White Matter Degeneration via Multi-View Learning of Diffusion Microstructure
Author / Creator:Fadnavis, Shreyas ; Polosecki, Pablo ; Garyfallidis, Eleftherios ; Castro, Eduardo ; Cecchi, Guillermo
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2021-04
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PainPoints: A Framework for Language-based Detection of Chronic Pain and Expert-Collaborative Text-Summarization
Author / Creator:Fadnavis, Shreyas ; Dhurandhar, Amit ; Norel, Raquel ; Reinen, Jenna M ; Agurto, Carla ; Secchettin, Erica ; Schweiger, Vittorio ; Perini, Giovanni ; Cecchi, Guillermo
Publisher:Ithaca: Cornell University Library, arXiv.org
Journal title:arXiv.org, 2022-09
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Data-driven characterization of Preterm Birth through intramodal Diffusion MRI
Author / Creator:Trò, Rosella Denise ; Roascio, Monica ; Tortora, Domenico ; Mariasavina Severino ; Rossi, Andrea ; Garyfallidis, Eleftherios ; Arnulfo, Gabriele ; Fato, Marco Massimo ; Fadnavis, Shreyas
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2023-01
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ThetA -- fast and robust clustering via a distance parameter
Author / Creator:Garyfallidis, Eleftherios ; Fadnavis, Shreyas ; Jong Sung Park ; Bramsh Qamar Chandio ; Guaje, Javier ; Koudoro, Serge ; Nasim Anousheh
Publisher:Ithaca: Cornell University Library, arXiv.org
Journal title:arXiv.org, 2021-03
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Fitting IVIM with Variable Projection and Simplicial Optimization
Author / Creator:Fadnavis, Shreyas ; Hamza Farooq ; Afzali, Maryam ; Lenglet, Christoph ; Georgiou, Tryphon ; Hu, Cheng ; Newman, Sharlene ; Shahnawaz Ahmed ; Rafael Neto Henriques ; Peterson, Eric ; Koudoro, Serge ; Rokem, Ariel ; Garyfallidis, Eleftherios
Publisher:Ithaca: Cornell University Library, arXiv.org
Journal title:arXiv.org, 2020-02
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ReportsFull Text
QSIPrep: an integrative platform for preprocessing and reconstructing diffusion MRI data
Author / Creator:Cieslak, Matthew ; Cook, Philip A ; He, Xiaosong ; Yeh, Fang-Cheng ; Dhollander, Thijs ; Adebimpe, Azeez ; Aguirre, Geoffrey K ; Bassett, Danielle S ; Betzel, Richard F ; Bourque, Josiane ; Cabral, Laura M ; Davatzikos, Christos ; Detre, John A ; Earl, Eric ; Elliott, Mark A ; Fadnavis, Shreyas ; Fair, Damien A
Publisher:Nature Publishing Group
Journal title:Nature Methods, 2021, Vol.18 (7), p.775
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ArticlesFull Text
Pandora: 4-D white matter bundle population-based atlases derived from diffusion MRI fiber tractography
Author / Creator:Hansen, Colin B ; Yang, Qi ; Lyu, Ilwoo ; Rheault, Francois ; Kerley, Cailey ; Bramsh Qamar Chandio ; Fadnavis, Shreyas ; Williams, Owen ; Shafer, Andrea T ; Resnick, Susan M ; Zald, David H ; Cutting, Laurie ; Taylor, Warren D ; Boyd, Brian ; Garyfallidis, Eleftherios ; Anderson, Adam W ; Descoteaux, Maxime ; Landman, Bennett A ; Schilling, Kurt
Publisher:Cold Spring Harbor: Cold Spring Harbor Laboratory Press
Journal title:bioRxiv, 2020-06
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QSIPrep: an integrative platform for preprocessing and reconstructing diffusion MRI data

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Multi-scale V-net architecture with deep feature CRF layers for brain extraction

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Multi-view fusion of diffusion MRI microstructural models: a preterm birth study

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Denoising of diffusion MRI in the cervical spinal cord – effects of denoising strategy and acquisition on intra-cord contrast, signal modeling, and feature conspicuity

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Bifurcated Topological Optimization for IVIM

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Pandora: 4-D White Matter Bundle Population-Based Atlases Derived from Diffusion MRI Fiber Tractography

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On the generalizability of diffusion MRI signal representations across acquisition parameters, sequences and tissue types: Chronicles of the MEMENTO challenge

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QSIPrep: An integrative platform for preprocessing and reconstructing diffusion MRI

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EVAC+: Multi-scale V-net with Deep Feature CRF Layers for Brain Extraction

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Mapping the "missing" pathways of the anterior cingulate cortex in the human brain

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Patch2Self: Denoising Diffusion MRI with Self-Supervised Learning

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Patch2Self denoising of Diffusion MRI with Self-Supervision and Matrix Sketching

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NUQ: A Noise Metric for Diffusion MRI via Uncertainty Discrepancy Quantification

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MVD-Fuse: Detection of White Matter Degeneration via Multi-View Learning of Diffusion Microstructure

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PainPoints: A Framework for Language-based Detection of Chronic Pain and Expert-Collaborative Text-Summarization

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Data-driven characterization of Preterm Birth through intramodal Diffusion MRI

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ThetA -- fast and robust clustering via a distance parameter

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Fitting IVIM with Variable Projection and Simplicial Optimization

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QSIPrep: an integrative platform for preprocessing and reconstructing diffusion MRI data

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Pandora: 4-D white matter bundle population-based atlases derived from diffusion MRI fiber tractography

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