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ArticlesPeer ReviewedFull Text
Genotyping Polyploids from Messy Sequencing Data
Author / Creator:Gerard, David ; Ferrão, Luis Felipe Ventorim ; Garcia, Antonio Augusto Franco ; Stephens, Matthew
Publisher:United States: Genetics Society of America
Journal title:Genetics (Austin), 2018-11, Vol.210 (3), p.789-807
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ArticlesPeer ReviewedFull Text
Linkage Analysis and Haplotype Phasing in Experimental Autopolyploid Populations with High Ploidy Level Using Hidden Markov Models
Author / Creator:Mollinari, Marcelo ; Franco Garcia, Antonio Augusto
Publisher:Oxford: Oxford University Press
Journal title:G3 : genes - genomes - genetics, 2019-10, Vol.9 (10), p.3297-3314
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ArticlesPeer ReviewedFull Text
Significance of linkage disequilibrium and epistasis on genetic variances in noninbred and inbred populations
Author / Creator:Viana, José Marcelo Soriano ; Garcia, Antonio Augusto Franco
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2022-04, Vol.23 (1), p.286-286, Article 286
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ArticlesPeer ReviewedFull Text
Efficient Exact Maximum a Posteriori Computation for Bayesian SNP Genotyping in Polyploids
Author / Creator:Serang, Oliver ; Mollinari, Marcelo ; Garcia, Antonio Augusto Franco
Publisher:United States: Public Library of Science
Journal title:PloS one, 2012-02, Vol.7 (2), p.e30906-e30906
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ArticlesPeer ReviewedFull Text
A genome-wide association study identified loci for yield component traits in sugarcane (Saccharum spp.)
Author / Creator:Barreto, Fernanda Zatti ; Rosa, João Ricardo Bachega Feijó ; Balsalobre, Thiago Willian Almeida ; Pastina, Maria Marta ; Silva, Renato Rodrigues ; Hoffmann, Hermann Paulo ; de Souza, Anete Pereira ; Garcia, Antonio Augusto Franco ; Carneiro, Monalisa Sampaio
Publisher:United States: Public Library of Science
Journal title:PloS one, 2019-07, Vol.14 (7), p.e0219843-e0219843
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ArticlesPeer ReviewedFull Text
Genome-Wide Association Studies of Anthracnose and Angular Leaf Spot Resistance in Common Bean (Phaseolus vulgaris L.)
Author / Creator:Perseguini, Juliana Morini Küpper Cardoso ; Oblessuc, Paula Rodrigues ; Rosa, João Ricardo Bachega Feijó ; Gomes, Kleber Alves ; Chiorato, Alisson Fernando ; Carbonell, Sérgio Augusto Morais ; Garcia, Antonio Augusto Franco ; Vianello, Rosana Pereira ; Benchimol-Reis, Luciana Lasry
Publisher:United States: Public Library of Science
Journal title:PloS one, 2016-03, Vol.11 (3), p.e0150506-e0150506
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ArticlesPeer ReviewedFull Text
De Novo Assembly and Transcriptome Analysis of Contrasting Sugarcane Varieties
Author / Creator:Cardoso-Silva, Claudio Benicio ; Costa, Estela Araujo ; Mancini, Melina Cristina ; Balsalobre, Thiago Willian Almeida ; Canesin, Lucas Eduardo Costa ; Pinto, Luciana Rossini ; Carneiro, Monalisa Sampaio ; Garcia, Antonio Augusto Franco ; de Souza, Anete Pereira ; Vicentini, Renato
Publisher:United States: Public Library of Science
Journal title:PloS one, 2014-02, Vol.9 (2), p.e88462-e88462
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ArticlesPeer ReviewedFull Text
Allele expression biases in mixed-ploid sugarcane accessions
Author / Creator:Correr, Fernando Henrique ; Furtado, Agnelo ; Franco Garcia, Antonio Augusto ; Henry, Robert James ; Rodrigues Alves Margarido, Gabriel
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2022-05, Vol.12 (1), p.8778-8778, Article 8778
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ArticlesPeer ReviewedFull Text
Genome-wide association studies dissect the genetic architecture of seed shape and size in common bean
Author / Creator:Giordani, Willian ; Gama, Henrique Castro ; Chiorato, Alisson Fernando ; Garcia, Antonio Augusto Franco ; Vieira, Maria Lucia Carneiro
Publisher:England: Oxford University Press
Journal title:G3 : genes - genomes - genetics, 2022-04, Vol.12 (4)
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ArticlesPeer ReviewedFull Text
A joint learning approach for genomic prediction in polyploid grasses
Author / Creator:Aono, Alexandre Hild ; Ferreira, Rebecca Caroline Ulbricht ; Moraes, Aline da Costa Lima ; Lara, Letícia Aparecida de Castro ; Pimenta, Ricardo José Gonzaga ; Costa, Estela Araujo ; Pinto, Luciana Rossini ; Landell, Marcos Guimarães de Andrade ; Santos, Mateus Figueiredo ; Jank, Liana ; Barrios, Sanzio Carvalho Lima ; do Valle, Cacilda Borges ; Chiari, Lucimara ; Garcia, Antonio Augusto Franco ; Kuroshu, Reginaldo Massanobu ; Lorena, Ana Carolina ; Gorjanc, Gregor ; de Souza, Anete Pereira
Publisher:London: Nature Publishing Group UK
Journal title:Scientific reports, 2022-07, Vol.12 (1), p.12499-12499, Article 12499
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ArticlesPeer ReviewedFull Text
Improving yield and fruit quality traits in sweet passion fruit: Evidence for genotype by environment interaction and selection of promising genotypes
Author / Creator:Chavarría-Perez, Lourdes Maria ; Giordani, Willian ; Dias, Kaio Olimpio Graças ; Costa, Zirlane Portugal ; Ribeiro, Carolina Albuquerque Massena ; Benedetti, Anderson Roberto ; Cauz-Santos, Luiz Augusto ; Pereira, Guilherme Silva ; Rosa, João Ricardo Bachega Feijó ; Garcia, Antonio Augusto Franco ; Vieira, Maria Lucia Carneiro
Publisher:United States: Public Library of Science
Journal title:PloS one, 2020-05, Vol.15 (5), p.e0232818-e0232818
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ArticlesPeer ReviewedFull Text
Quantitative Trait Loci Mapping and The Genetic Basis of Heterosis in Maize and Rice
Author / Creator:Garcia, Antonio Augusto Franco ; Wang, Shengchu ; Melchinger, Albrecht E ; Zeng, Zhao-Bang
Publisher:United States: Genetics Soc America
Journal title:Genetics (Austin), 2008-11, Vol.180 (3), p.1707-1724
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ArticlesPeer ReviewedFull Text
QTL Mapping of Growth-Related Traits in a Full-Sib Family of Rubber Tree (Hevea brasiliensis) Evaluated in a Sub-Tropical Climate
Author / Creator:Souza, Livia Moura ; Gazaffi, Rodrigo ; Mantello, Camila Campos ; Silva, Carla Cristina ; Garcia, Dominique ; Le Guen, Vincent ; Cardoso, Saulo Emilio Almeida ; Garcia, Antonio Augusto Franco ; Souza, Anete Pereira
Publisher:United States: Public Library of Science
Journal title:PloS one, 2013-04, Vol.8 (4), p.e61238-e61238
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ArticlesPeer ReviewedFull Text
QTL detection for growth and latex production in a full-sib rubber tree population cultivated under suboptimal climate conditions
Author / Creator:Rosa, João Ricardo Bachega Feijó ; Mantello, Camila Campos ; Garcia, Dominique ; de Souza, Lívia Moura ; da Silva, Carla Cristina ; Gazaffi, Rodrigo ; da Silva, Cícero Casimiro ; Toledo-Silva, Guilherme ; Cubry, Philippe ; Garcia, Antonio Augusto Franco ; de Souza, Anete Pereira ; Le Guen, Vincent
Publisher:England: BioMed Central
Journal title:BMC plant biology, 2018-10, Vol.18 (1), p.223-223, Article 223
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ArticlesPeer ReviewedFull Text
Genetic Variability, Correlation among Agronomic Traits, and Genetic Progress in a Sugarcane Diversity Panel
Author / Creator:Barreto, Fernanda Zatti ; Balsalobre, Thiago Willian Almeida ; Chapola, Roberto Giacomini ; Garcia, Antonio Augusto Franco ; Souza, Anete Pereira ; Hoffmann, Hermann Paulo ; Gazaffi, Rodrigo ; Carneiro, Monalisa Sampaio
Publisher:Basel: MDPI AG
Journal title:Agriculture (Basel), 2021-06, Vol.11 (6), p.533
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ArticlesPeer ReviewedFull Text
Genetic mapping reveals complex architecture and candidate genes involved in common bean response to Meloidogyne incognita infection
Author / Creator:Giordani, Willian ; Gama, Henrique Castro ; Chiorato, Alisson Fernando ; Marques, João Paulo Rodrigues ; Huo, Heqiang ; Benchimol‐Reis, Luciana Lasry ; Camargo, Luis Eduardo Aranha ; Garcia, Antonio Augusto Franco ; Vieira, Maria Lucia Carneiro
Publisher:United States: John Wiley & Sons, Inc
Journal title:The plant genome, 2022-03, Vol.15 (1), p.e20161-n/a
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QTL mapping for bioenergy traits in sweet sorghum recombinant inbred lines
Author / Creator:Souza, Vander Fillipe de ; Pereira, Guilherme da Silva ; Pastina, Maria Marta ; Parrella, Rafael Augusto da Costa ; Simeone, Maria Lúcia Ferreira ; Barros, Beatriz de Almeida ; Noda, Roberto Willians ; da Costa e Silva, Luciano ; Magalhães, Jurandir Vieira de ; Schaffert, Robert Eugene ; Garcia, Antonio Augusto Franco ; Damasceno, Cynthia Maria Borges
Publisher:England: Oxford University Press
Journal title:G3 : genes - genomes - genetics, 2021-10, Vol.11 (11)
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GBS-based single dosage markers for linkage and QTL mapping allow gene mining for yield-related traits in sugarcane
Author / Creator:Balsalobre, Thiago Willian Almeida ; da Silva Pereira, Guilherme ; Margarido, Gabriel Rodrigues Alves ; Gazaffi, Rodrigo ; Barreto, Fernanda Zatti ; Anoni, Carina Oliveira ; Cardoso-Silva, Cláudio Benício ; Costa, Estela Araújo ; Mancini, Melina Cristina ; Hoffmann, Hermann Paulo ; de Souza, Anete Pereira ; Garcia, Antonio Augusto Franco ; Carneiro, Monalisa Sampaio
Publisher:England: BioMed Central Ltd
Journal title:BMC genomics, 2017-01, Vol.18 (1), p.72-72, Article 72
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Accurate genomic prediction of Coffea canephora in multiple environments using whole-genome statistical models
Author / Creator:Ferrão, Luís Felipe Ventorim ; Ferrão, Romário Gava ; Ferrão, Maria Amélia Gava ; Fonseca, Aymbiré ; Carbonetto, Peter ; Stephens, Matthew ; Garcia, Antonio Augusto Franco
Publisher:England: Springer Nature B.V
Journal title:Heredity, 2019-03, Vol.122 (3), p.261-275
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Quantitative trait loci analysis of citrus leprosis resistance in an interspecific backcross family of (Citrus reticulata Blanco × C. sinensis L. Osbeck) × C. sinensis L. Osb
Author / Creator:Bastianel, Marinês ; Cristofani-Yaly, Mariângela ; de Oliveira, Antonio Carlos ; Freitas-Astúa, Juliana ; Garcia, Antonio Augusto Franco ; de Resende, Marcos Deon Vilela ; Rodrigues, Vandeclei ; Machado, Marcos Antônio
Publisher:Dordrecht: Springer Netherlands
Journal title:Euphytica, 2009-09, Vol.169 (1), p.101-111
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Showing 1 to 20 of 46 results

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Genotyping Polyploids from Messy Sequencing Data

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Linkage Analysis and Haplotype Phasing in Experimental Autopolyploid Populations with High Ploidy Level Using Hidden Markov Models

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Significance of linkage disequilibrium and epistasis on genetic variances in noninbred and inbred populations

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Efficient Exact Maximum a Posteriori Computation for Bayesian SNP Genotyping in Polyploids

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A genome-wide association study identified loci for yield component traits in sugarcane (Saccharum spp.)

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Genome-Wide Association Studies of Anthracnose and Angular Leaf Spot Resistance in Common Bean (Phaseolus vulgaris L.)

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De Novo Assembly and Transcriptome Analysis of Contrasting Sugarcane Varieties

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Allele expression biases in mixed-ploid sugarcane accessions

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Genome-wide association studies dissect the genetic architecture of seed shape and size in common bean

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A joint learning approach for genomic prediction in polyploid grasses

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Improving yield and fruit quality traits in sweet passion fruit: Evidence for genotype by environment interaction and selection of promising genotypes

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Quantitative Trait Loci Mapping and The Genetic Basis of Heterosis in Maize and Rice

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QTL Mapping of Growth-Related Traits in a Full-Sib Family of Rubber Tree (Hevea brasiliensis) Evaluated in a Sub-Tropical Climate

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QTL detection for growth and latex production in a full-sib rubber tree population cultivated under suboptimal climate conditions

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Genetic Variability, Correlation among Agronomic Traits, and Genetic Progress in a Sugarcane Diversity Panel

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Genetic mapping reveals complex architecture and candidate genes involved in common bean response to Meloidogyne incognita infection

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QTL mapping for bioenergy traits in sweet sorghum recombinant inbred lines

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GBS-based single dosage markers for linkage and QTL mapping allow gene mining for yield-related traits in sugarcane

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Accurate genomic prediction of Coffea canephora in multiple environments using whole-genome statistical models

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Quantitative trait loci analysis of citrus leprosis resistance in an interspecific backcross family of (Citrus reticulata Blanco × C. sinensis L. Osbeck) × C. sinensis L. Osb

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